Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC120498.9-201ENST00000339021 3867 ntBASIC18.58■□□□□ 0.56
AP1S2P56377 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.58■□□□□ 0.56
AP1S2P56377 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S2P56377 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S2P56377 AC004951.3-201ENST00000418645 1148 ntBASIC18.58■□□□□ 0.56
AP1S2P56377 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S2P56377 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.58■□□□□ 0.56
AP1S2P56377 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.58■□□□□ 0.56
AP1S2P56377 PRSS44-201ENST00000515154 1146 ntBASIC18.58■□□□□ 0.56
AP1S2P56377 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.58■□□□□ 0.56
AP1S2P56377 AP001412.1-201ENST00000608405 714 ntBASIC18.58■□□□□ 0.56
AP1S2P56377 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.58■□□□□ 0.56
AP1S2P56377 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.58■□□□□ 0.56
AP1S2P56377 RCC2P6-201ENST00000526625 1557 ntBASIC18.58■□□□□ 0.56
AP1S2P56377 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S2P56377 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S2P56377 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
AP1S2P56377 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S2P56377 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S2P56377 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S2P56377 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
AP1S2P56377 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S2P56377 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
AP1S2P56377 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.57■□□□□ 0.56
AP1S2P56377 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.57■□□□□ 0.56
AP1S2P56377 AC012618.2-201ENST00000428058 849 ntBASIC18.57■□□□□ 0.56
AP1S2P56377 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.57■□□□□ 0.56
AP1S2P56377 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.57■□□□□ 0.56
AP1S2P56377 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.57■□□□□ 0.56
AP1S2P56377 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.57■□□□□ 0.56
AP1S2P56377 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.57■□□□□ 0.56
AP1S2P56377 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.57■□□□□ 0.56
AP1S2P56377 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S2P56377 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
AP1S2P56377 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
AP1S2P56377 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.56■□□□□ 0.56
AP1S2P56377 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
AP1S2P56377 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.56■□□□□ 0.56
AP1S2P56377 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.56■□□□□ 0.56
AP1S2P56377 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.56■□□□□ 0.56
AP1S2P56377 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.56■□□□□ 0.56
AP1S2P56377 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
AP1S2P56377 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.56■□□□□ 0.56
AP1S2P56377 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S2P56377 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.55■□□□□ 0.56
AP1S2P56377 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S2P56377 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.55■□□□□ 0.56
AP1S2P56377 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S2P56377 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.55■□□□□ 0.56
AP1S2P56377 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
AP1S2P56377 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S2P56377 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.55■□□□□ 0.56
AP1S2P56377 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.55■□□□□ 0.56
AP1S2P56377 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.55■□□□□ 0.56
AP1S2P56377 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S2P56377 AC091390.4-202ENST00000476426 537 ntBASIC18.55■□□□□ 0.56
AP1S2P56377 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.55■□□□□ 0.56
AP1S2P56377 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.55■□□□□ 0.56
AP1S2P56377 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
AP1S2P56377 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.55■□□□□ 0.56
AP1S2P56377 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.55■□□□□ 0.56
AP1S2P56377 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.55■□□□□ 0.56
AP1S2P56377 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S2P56377 KRT8P11-201ENST00000409686 1436 ntBASIC18.55■□□□□ 0.56
AP1S2P56377 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S2P56377 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
AP1S2P56377 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S2P56377 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
AP1S2P56377 AC006333.2-201ENST00000607957 2099 ntBASIC18.54■□□□□ 0.56
AP1S2P56377 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
AP1S2P56377 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP1S2P56377 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP1S2P56377 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP1S2P56377 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP1S2P56377 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
AP1S2P56377 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.54■□□□□ 0.56
AP1S2P56377 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP1S2P56377 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP1S2P56377 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms