Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.37■□□□□ 0.53
EPHA4P54764 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA4P54764 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA4P54764 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA4P54764 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA4P54764 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA4P54764 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA4P54764 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.37■□□□□ 0.53
EPHA4P54764 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA4P54764 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EPHA4P54764 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
EPHA4P54764 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.37■□□□□ 0.53
EPHA4P54764 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.36■□□□□ 0.53
EPHA4P54764 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
EPHA4P54764 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
EPHA4P54764 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 KRT8P45-201ENST00000414328 1447 ntBASIC18.36■□□□□ 0.53
EPHA4P54764 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.36■□□□□ 0.53
EPHA4P54764 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 HOMER2P1-201ENST00000455653 964 ntBASIC18.36■□□□□ 0.53
EPHA4P54764 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.36■□□□□ 0.53
EPHA4P54764 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.36■□□□□ 0.53
EPHA4P54764 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.36■□□□□ 0.53
EPHA4P54764 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.36■□□□□ 0.53
EPHA4P54764 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.36■□□□□ 0.53
EPHA4P54764 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.36■□□□□ 0.53
EPHA4P54764 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA4P54764 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
EPHA4P54764 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
EPHA4P54764 TREX1-205ENST00000625293 1783 ntBASIC18.35■□□□□ 0.53
EPHA4P54764 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
EPHA4P54764 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.35■□□□□ 0.53
EPHA4P54764 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.35■□□□□ 0.53
EPHA4P54764 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.35■□□□□ 0.53
EPHA4P54764 AC092647.4-201ENST00000457211 535 ntBASIC18.35■□□□□ 0.53
EPHA4P54764 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.35■□□□□ 0.53
EPHA4P54764 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.35■□□□□ 0.53
EPHA4P54764 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.35■□□□□ 0.53
EPHA4P54764 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
EPHA4P54764 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
EPHA4P54764 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA4P54764 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA4P54764 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
EPHA4P54764 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA4P54764 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA4P54764 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
EPHA4P54764 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA4P54764 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA4P54764 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EPHA4P54764 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
EPHA4P54764 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA4P54764 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA4P54764 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA4P54764 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.34■□□□□ 0.53
EPHA4P54764 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA4P54764 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA4P54764 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.34■□□□□ 0.53
EPHA4P54764 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.34■□□□□ 0.53
EPHA4P54764 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA4P54764 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
EPHA4P54764 AC140113.3-201ENST00000605663 199 ntBASIC18.34■□□□□ 0.53
EPHA4P54764 AC011558.1-201ENST00000623459 338 ntBASIC18.34■□□□□ 0.53
EPHA4P54764 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA4P54764 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA4P54764 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EPHA4P54764 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
EPHA4P54764 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHA4P54764 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
EPHA4P54764 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
EPHA4P54764 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
EPHA4P54764 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
EPHA4P54764 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.33■□□□□ 0.53
EPHA4P54764 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHA4P54764 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
EPHA4P54764 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA4P54764 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms