Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.32■■□□□ 1.32
PDE1AP54750 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.32■■□□□ 1.32
PDE1AP54750 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.32■■□□□ 1.32
PDE1AP54750 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.32■■□□□ 1.32
PDE1AP54750 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PDE1AP54750 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDE1AP54750 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PDE1AP54750 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.31■■□□□ 1.32
PDE1AP54750 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PDE1AP54750 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 AC012618.2-201ENST00000428058 849 ntBASIC23.31■■□□□ 1.32
PDE1AP54750 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.31■■□□□ 1.32
PDE1AP54750 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.31■■□□□ 1.32
PDE1AP54750 MIR6786-201ENST00000616843 113 ntBASIC23.31■■□□□ 1.32
PDE1AP54750 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.31■■□□□ 1.32
PDE1AP54750 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDE1AP54750 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.31■■□□□ 1.32
PDE1AP54750 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.3■■□□□ 1.32
PDE1AP54750 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PDE1AP54750 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.3■■□□□ 1.32
PDE1AP54750 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PDE1AP54750 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PDE1AP54750 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.3■■□□□ 1.32
PDE1AP54750 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.3■■□□□ 1.32
PDE1AP54750 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
PDE1AP54750 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDE1AP54750 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.29■■□□□ 1.32
PDE1AP54750 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PDE1AP54750 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.29■■□□□ 1.32
PDE1AP54750 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.29■■□□□ 1.32
PDE1AP54750 PRSS44-201ENST00000515154 1146 ntBASIC23.29■■□□□ 1.32
PDE1AP54750 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.29■■□□□ 1.32
PDE1AP54750 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.29■■□□□ 1.32
PDE1AP54750 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.29■■□□□ 1.32
PDE1AP54750 AL049637.2-201ENST00000641778 930 ntBASIC23.29■■□□□ 1.32
PDE1AP54750 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.29■■□□□ 1.32
PDE1AP54750 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.29■■□□□ 1.32
PDE1AP54750 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.29■■□□□ 1.32
PDE1AP54750 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDE1AP54750 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
PDE1AP54750 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC23.28■■□□□ 1.32
PDE1AP54750 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
PDE1AP54750 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
PDE1AP54750 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.28■■□□□ 1.32
PDE1AP54750 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.28■■□□□ 1.32
PDE1AP54750 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.28■■□□□ 1.32
PDE1AP54750 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
PDE1AP54750 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.28■■□□□ 1.32
PDE1AP54750 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PDE1AP54750 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.28■■□□□ 1.32
PDE1AP54750 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDE1AP54750 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms