Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.39□□□□□ -0.115e-7■■□□□ 13.4
SUB1P53999 VPS51-202ENST00000526578 534 ntTSL 214.17□□□□□ -0.145e-7■■□□□ 13.4
SUB1P53999 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.175e-7■■□□□ 13.4
SUB1P53999 VPS51-215ENST00000534557 854 ntAPPRIS ALT2 TSL 313.67□□□□□ -0.225e-7■■□□□ 13.4
SUB1P53999 AARS-207ENST00000569825 871 ntTSL 213.39□□□□□ -0.275e-7■■□□□ 13.4
SUB1P53999 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.365e-7■■□□□ 13.4
SUB1P53999 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.395e-7■■□□□ 13.4
SUB1P53999 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.51□□□□□ -0.415e-7■■□□□ 13.4
SUB1P53999 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.435e-7■■□□□ 13.4
SUB1P53999 PTOV1-217ENST00000601501 564 ntTSL 212.25□□□□□ -0.455e-7■■□□□ 13.4
SUB1P53999 INTS1-207ENST00000493531 828 ntTSL 312.19□□□□□ -0.465e-7■■□□□ 13.4
SUB1P53999 EIF3G-207ENST00000589009 1522 ntTSL 211.81□□□□□ -0.525e-7■■□□□ 13.4
SUB1P53999 DLG5-206ENST00000468332 5505 ntTSL 211.49□□□□□ -0.577e-7■■□□□ 13.4
SUB1P53999 DLG5-207ENST00000475613 7246 ntTSL 511.45□□□□□ -0.587e-7■■□□□ 13.4
SUB1P53999 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.595e-7■■□□□ 13.4
SUB1P53999 PPP2R5D-205ENST00000470467 2567 ntTSL 1 (best)11.04□□□□□ -0.645e-7■■□□□ 13.4
SUB1P53999 HINT1-204ENST00000506908 681 ntTSL 2 BASIC10.73□□□□□ -0.695e-7■■□□□ 13.4
SUB1P53999 HINT1-205ENST00000508488 703 ntTSL 2 BASIC10.64□□□□□ -0.715e-7■■□□□ 13.4
SUB1P53999 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.727e-7■■□□□ 13.4
SUB1P53999 EIF3G-206ENST00000588709 828 ntTSL 510.41□□□□□ -0.745e-7■■□□□ 13.4
SUB1P53999 PTOV1-221ENST00000602040 597 ntTSL 210.34□□□□□ -0.755e-7■■□□□ 13.4
SUB1P53999 PPP2R5D-201ENST00000230402 2958 ntTSL 210.3□□□□□ -0.765e-7■■□□□ 13.4
SUB1P53999 EIF3G-214ENST00000593066 590 ntTSL 59.96□□□□□ -0.825e-7■■□□□ 13.4
SUB1P53999 PTOV1-204ENST00000594640 490 ntTSL 39.76□□□□□ -0.855e-7■■□□□ 13.4
SUB1P53999 EIF3G-202ENST00000587146 709 ntTSL 59.7□□□□□ -0.865e-7■■□□□ 13.4
SUB1P53999 AARS-203ENST00000565361 839 ntTSL 59.28□□□□□ -0.925e-7■■□□□ 13.4
SUB1P53999 HINT1-208ENST00000513012 583 ntTSL 4 BASIC8.59□□□□□ -1.035e-7■■□□□ 13.4
SUB1P53999 DLG5-202ENST00000424842 4292 ntTSL 1 (best)8.5□□□□□ -1.057e-7■■□□□ 13.4
SUB1P53999 EIF3G-205ENST00000587993 555 ntTSL 38.34□□□□□ -1.075e-7■■□□□ 13.4
SUB1P53999 TLN1-205ENST00000466916 446 ntTSL 28.21□□□□□ -1.15e-7■■□□□ 13.4
SUB1P53999 AARS-202ENST00000564359 590 ntTSL 38.03□□□□□ -1.125e-7■■□□□ 13.4
SUB1P53999 ENO2-203ENST00000534977 351 ntTSL 37.85□□□□□ -1.155e-7■■□□□ 13.4
SUB1P53999 LSS-203ENST00000419093 517 ntTSL 37.83□□□□□ -1.165e-7■■□□□ 13.4
SUB1P53999 EIF3G-208ENST00000589454 873 ntTSL 57.53□□□□□ -1.25e-7■■□□□ 13.4
SUB1P53999 EIF3G-215ENST00000593095 636 ntTSL 37.43□□□□□ -1.225e-7■■□□□ 13.4
SUB1P53999 EIF3G-211ENST00000590940 762 ntTSL 37.23□□□□□ -1.255e-7■■□□□ 13.4
SUB1P53999 VPS51-205ENST00000528050 426 ntTSL 27.09□□□□□ -1.275e-7■■□□□ 13.4
SUB1P53999 EIF3G-204ENST00000587681 537 ntTSL 25.4□□□□□ -1.545e-7■■□□□ 13.4
SUB1P53999 ENO2-213ENST00000543975 416 ntTSL 54.68□□□□□ -1.665e-7■■□□□ 13.4
SUB1P53999 HINT1-210ENST00000520028 82 ntTSL 32.81□□□□□ -1.965e-7■■□□□ 13.4
SUB1P53999 IMPDH2-212ENST00000496837 760 ntTSL 211.28□□□□□ -0.62e-7■■□□□ 13.4
SUB1P53999 ATP5B-208ENST00000551182 457 ntTSL 25.39□□□□□ -1.555e-49■■□□□ 13.4
SUB1P53999 TFRC-205ENST00000426789 354 ntTSL 31.21□□□□□ -2.225e-7■■□□□ 13.4
SUB1P53999 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.185e-7■■□□□ 13.4
SUB1P53999 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.41■■□□□ 1.025e-7■■□□□ 13.4
SUB1P53999 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.998e-14■■□□□ 13.4
SUB1P53999 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.865e-7■■□□□ 13.4
SUB1P53999 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.415e-7■■□□□ 13.4
SUB1P53999 TMEM165-205ENST00000508404 1657 ntTSL 217.36■□□□□ 0.375e-7■■□□□ 13.4
SUB1P53999 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.52■□□□□ 0.245e-7■■□□□ 13.4
SUB1P53999 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.42□□□□□ -0.265e-7■■□□□ 13.4
SUB1P53999 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.275e-7■■□□□ 13.4
SUB1P53999 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.38□□□□□ -0.275e-7■■□□□ 13.4
SUB1P53999 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.02□□□□□ -0.495e-7■■□□□ 13.4
SUB1P53999 PLIN3-205ENST00000589163 1699 ntTSL 311.65□□□□□ -0.545e-7■■□□□ 13.4
SUB1P53999 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.3□□□□□ -0.65e-7■■□□□ 13.4
SUB1P53999 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.06□□□□□ -0.648e-14■■□□□ 13.4
SUB1P53999 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC10.66□□□□□ -0.75e-7■■□□□ 13.4
SUB1P53999 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.715e-7■■□□□ 13.4
SUB1P53999 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC10.37□□□□□ -0.755e-7■■□□□ 13.4
SUB1P53999 ANXA5-203ENST00000506395 1606 ntTSL 59.76□□□□□ -0.855e-7■■□□□ 13.4
SUB1P53999 TMEM165-206ENST00000508561 756 ntTSL 59.74□□□□□ -0.855e-7■■□□□ 13.4
SUB1P53999 RTN3-207ENST00000536011 992 ntTSL 29.74□□□□□ -0.858e-14■■□□□ 13.4
SUB1P53999 TMEM165-203ENST00000506103 572 ntTSL 39.02□□□□□ -0.975e-7■■□□□ 13.4
SUB1P53999 TMEM165-212ENST00000608091 1567 ntTSL 37.94□□□□□ -1.145e-7■■□□□ 13.4
SUB1P53999 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC7.83□□□□□ -1.168e-14■■□□□ 13.4
SUB1P53999 TMEM165-210ENST00000514904 1522 ntTSL 27.79□□□□□ -1.165e-7■■□□□ 13.4
SUB1P53999 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.64□□□□□ -1.195e-7■■□□□ 13.4
SUB1P53999 RACGAP1-201ENST00000312377 3073 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.25e-7■■□□□ 13.4
SUB1P53999 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.395e-7■■□□□ 13.4
SUB1P53999 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.23□□□□□ -1.575e-7■■□□□ 13.4
SUB1P53999 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.625e-7■■□□□ 13.4
SUB1P53999 TMEM165-211ENST00000515591 1786 ntTSL 24.01□□□□□ -1.775e-7■■□□□ 13.4
SUB1P53999 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.835e-7■■□□□ 13.4
SUB1P53999 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.06■□□□□ 0.327e-7■■□□□ 13.4
SUB1P53999 ARPC4-204ENST00000440787 910 ntTSL 314.86□□□□□ -0.037e-7■■□□□ 13.4
SUB1P53999 ARPC4-202ENST00000417500 957 ntTSL 514.59□□□□□ -0.077e-7■■□□□ 13.4
SUB1P53999 ATP1B3-207ENST00000484727 657 ntTSL 25.04□□□□□ -1.62e-16■■□□□ 13.4
SUB1P53999 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.363e-6■■□□□ 13.3
SUB1P53999 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.943e-6■■□□□ 13.3
SUB1P53999 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.11■□□□□ 0.651e-7■■□□□ 13.3
SUB1P53999 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.561e-7■■□□□ 13.3
SUB1P53999 YWHAH-205ENST00000471374 1735 ntTSL 214.72□□□□□ -0.051e-7■■□□□ 13.3
SUB1P53999 RBM3-206ENST00000485213 947 ntTSL 213.73□□□□□ -0.213e-12■■□□□ 13.3
SUB1P53999 RBM3-205ENST00000472897 501 ntTSL 512.1□□□□□ -0.473e-12■■□□□ 13.3
SUB1P53999 RBM3-211ENST00000491240 951 ntTSL 1 (best)11.95□□□□□ -0.53e-12■■□□□ 13.3
SUB1P53999 RBM3-207ENST00000488216 835 ntTSL 311.2□□□□□ -0.623e-12■■□□□ 13.3
SUB1P53999 RBM3-209ENST00000490127 567 ntTSL 58.47□□□□□ -1.053e-12■■□□□ 13.3
SUB1P53999 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.583e-7■■□□□ 13.3
SUB1P53999 UROD-219ENST00000494399 1848 ntTSL 211.14□□□□□ -0.633e-7■■□□□ 13.3
SUB1P53999 UROD-212ENST00000472254 934 ntTSL 28.63□□□□□ -1.033e-7■■□□□ 13.3
SUB1P53999 UROD-222ENST00000636836 1173 ntTSL 5 BASIC8.47□□□□□ -1.053e-7■■□□□ 13.3
SUB1P53999 UROD-221ENST00000636293 1102 ntTSL 5 BASIC8.47□□□□□ -1.053e-7■■□□□ 13.3
SUB1P53999 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.63□□□□□ -0.071e-6■■□□□ 13.3
SUB1P53999 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.421e-6■■□□□ 13.3
SUB1P53999 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.261e-6■■□□□ 13.3
SUB1P53999 RBM3-204ENST00000466764 1375 ntTSL 312.83□□□□□ -0.367e-12■■□□□ 13.3
SUB1P53999 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.897e-12■■□□□ 13.3
SUB1P53999 IMPDH2-201ENST00000326739 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.941e-7■■□□□ 13.3
SUB1P53999 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.08□□□□□ -0.482e-7■■□□□ 13.3
Retrieved 100 of 11,644 protein–RNA pairs in 265.5 ms