Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.61■■□□□ 1.05
LBX1P52954 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LBX1P52954 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LBX1P52954 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LBX1P52954 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LBX1P52954 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.61■■□□□ 1.05
LBX1P52954 GPR32P1-201ENST00000601788 811 ntBASIC21.61■■□□□ 1.05
LBX1P52954 MIR1199-201ENST00000621445 119 ntBASIC21.61■■□□□ 1.05
LBX1P52954 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.61■■□□□ 1.05
LBX1P52954 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LBX1P52954 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LBX1P52954 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LBX1P52954 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
LBX1P52954 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.6■■□□□ 1.05
LBX1P52954 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.6■■□□□ 1.05
LBX1P52954 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.6■■□□□ 1.05
LBX1P52954 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LBX1P52954 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LBX1P52954 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
LBX1P52954 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
LBX1P52954 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LBX1P52954 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LBX1P52954 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LBX1P52954 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.6■■□□□ 1.05
LBX1P52954 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.6■■□□□ 1.05
LBX1P52954 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.6■■□□□ 1.05
LBX1P52954 SNHG9-202ENST00000564014 471 ntBASIC21.6■■□□□ 1.05
LBX1P52954 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.6■■□□□ 1.05
LBX1P52954 Z83851.2-201ENST00000609564 659 ntBASIC21.6■■□□□ 1.05
LBX1P52954 AC106028.4-201ENST00000614509 607 ntBASIC21.6■■□□□ 1.05
LBX1P52954 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
LBX1P52954 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LBX1P52954 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LBX1P52954 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LBX1P52954 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
LBX1P52954 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
LBX1P52954 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.6■■□□□ 1.05
LBX1P52954 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LBX1P52954 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.6■■□□□ 1.05
LBX1P52954 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
LBX1P52954 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.59■■□□□ 1.05
LBX1P52954 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
LBX1P52954 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 KRT18P23-201ENST00000435622 1283 ntBASIC21.59■■□□□ 1.05
LBX1P52954 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.59■■□□□ 1.05
LBX1P52954 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 SPCS2P1-201ENST00000561636 679 ntBASIC21.59■■□□□ 1.05
LBX1P52954 AC002347.1-201ENST00000569543 541 ntBASIC21.59■■□□□ 1.05
LBX1P52954 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.59■■□□□ 1.05
LBX1P52954 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
LBX1P52954 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.59■■□□□ 1.05
LBX1P52954 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.59■■□□□ 1.05
LBX1P52954 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LBX1P52954 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LBX1P52954 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.59■■□□□ 1.05
LBX1P52954 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.59■■□□□ 1.05
LBX1P52954 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.58■■□□□ 1.05
LBX1P52954 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LBX1P52954 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LBX1P52954 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LBX1P52954 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LBX1P52954 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LBX1P52954 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.58■■□□□ 1.05
LBX1P52954 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LBX1P52954 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.58■■□□□ 1.05
LBX1P52954 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LBX1P52954 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.58■■□□□ 1.05
LBX1P52954 FGFR3P6-201ENST00000457012 610 ntBASIC21.58■■□□□ 1.05
LBX1P52954 BNIP3P18-201ENST00000593976 575 ntBASIC21.58■■□□□ 1.05
LBX1P52954 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LBX1P52954 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.57■■□□□ 1.04
LBX1P52954 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LBX1P52954 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LBX1P52954 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.57■■□□□ 1.04
LBX1P52954 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LBX1P52954 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.57■■□□□ 1.04
LBX1P52954 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.57■■□□□ 1.04
LBX1P52954 AL023284.2-201ENST00000405850 579 ntBASIC21.57■■□□□ 1.04
LBX1P52954 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.57■■□□□ 1.04
LBX1P52954 AC092910.1-201ENST00000482027 1129 ntBASIC21.57■■□□□ 1.04
LBX1P52954 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.57■■□□□ 1.04
LBX1P52954 RNA5SP416-201ENST00000516838 111 ntBASIC21.57■■□□□ 1.04
LBX1P52954 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.57■■□□□ 1.04
LBX1P52954 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.57■■□□□ 1.04
LBX1P52954 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.57■■□□□ 1.04
LBX1P52954 MTDHP5-201ENST00000598980 586 ntBASIC21.57■■□□□ 1.04
LBX1P52954 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.57■■□□□ 1.04
LBX1P52954 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LBX1P52954 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.57■■□□□ 1.04
LBX1P52954 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.57■■□□□ 1.04
LBX1P52954 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LBX1P52954 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms