Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CLCN4P51793 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLCN4P51793 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.08■□□□□ 0.81
CLCN4P51793 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.08■□□□□ 0.81
CLCN4P51793 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CLCN4P51793 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 AC026396.1-201ENST00000419388 421 ntBASIC20.08■□□□□ 0.81
CLCN4P51793 TSPY23P-201ENST00000440136 739 ntBASIC20.08■□□□□ 0.81
CLCN4P51793 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLCN4P51793 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CLCN4P51793 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN4P51793 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.08■□□□□ 0.81
CLCN4P51793 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.08■□□□□ 0.81
CLCN4P51793 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CLCN4P51793 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN4P51793 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CLCN4P51793 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
CLCN4P51793 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.08■□□□□ 0.8
CLCN4P51793 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN4P51793 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN4P51793 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 ZNF815P-204ENST00000434898 1737 ntBASIC20.07■□□□□ 0.8
CLCN4P51793 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.07■□□□□ 0.8
CLCN4P51793 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
CLCN4P51793 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLCN4P51793 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.07■□□□□ 0.8
CLCN4P51793 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.07■□□□□ 0.8
CLCN4P51793 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLCN4P51793 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.07■□□□□ 0.8
CLCN4P51793 AC012313.10-201ENST00000623509 926 ntBASIC20.07■□□□□ 0.8
CLCN4P51793 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLCN4P51793 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLCN4P51793 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLCN4P51793 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CLCN4P51793 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN4P51793 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.06■□□□□ 0.8
CLCN4P51793 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN4P51793 RASA4DP-201ENST00000460726 1199 ntBASIC20.06■□□□□ 0.8
CLCN4P51793 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN4P51793 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN4P51793 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CLCN4P51793 NPAP1P7-201ENST00000613027 823 ntBASIC20.06■□□□□ 0.8
CLCN4P51793 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.06■□□□□ 0.8
CLCN4P51793 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.06■□□□□ 0.8
CLCN4P51793 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN4P51793 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CLCN4P51793 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.05■□□□□ 0.8
CLCN4P51793 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CLCN4P51793 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.05■□□□□ 0.8
CLCN4P51793 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms