Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
GRIA1P42261 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.35■□□□□ 0.69
GRIA1P42261 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
GRIA1P42261 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 AC009113.1-201ENST00000570267 2443 ntBASIC19.34■□□□□ 0.69
GRIA1P42261 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
GRIA1P42261 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GRIA1P42261 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.34■□□□□ 0.69
GRIA1P42261 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.34■□□□□ 0.69
GRIA1P42261 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.34■□□□□ 0.69
GRIA1P42261 AC128676.1-201ENST00000454392 318 ntBASIC19.34■□□□□ 0.69
GRIA1P42261 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 AC133681.1-201ENST00000465482 601 ntBASIC19.34■□□□□ 0.69
GRIA1P42261 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.34■□□□□ 0.69
GRIA1P42261 CD99P1-205ENST00000527459 561 ntBASIC19.34■□□□□ 0.69
GRIA1P42261 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.34■□□□□ 0.69
GRIA1P42261 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.34■□□□□ 0.69
GRIA1P42261 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.34■□□□□ 0.69
GRIA1P42261 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.34■□□□□ 0.69
GRIA1P42261 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.34■□□□□ 0.69
GRIA1P42261 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
GRIA1P42261 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GRIA1P42261 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIA1P42261 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.33■□□□□ 0.69
GRIA1P42261 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GRIA1P42261 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
GRIA1P42261 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.33■□□□□ 0.69
GRIA1P42261 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GRIA1P42261 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
GRIA1P42261 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GRIA1P42261 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.33■□□□□ 0.68
GRIA1P42261 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.33■□□□□ 0.68
GRIA1P42261 Z85996.1-201ENST00000494644 937 ntBASIC19.33■□□□□ 0.68
GRIA1P42261 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.33■□□□□ 0.68
GRIA1P42261 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.33■□□□□ 0.68
GRIA1P42261 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
GRIA1P42261 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GRIA1P42261 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
GRIA1P42261 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GRIA1P42261 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GRIA1P42261 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GRIA1P42261 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GRIA1P42261 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.33■□□□□ 0.68
GRIA1P42261 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GRIA1P42261 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.33■□□□□ 0.68
GRIA1P42261 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
GRIA1P42261 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GRIA1P42261 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
GRIA1P42261 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.32■□□□□ 0.68
GRIA1P42261 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GRIA1P42261 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GRIA1P42261 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
GRIA1P42261 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
GRIA1P42261 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GRIA1P42261 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.32■□□□□ 0.68
GRIA1P42261 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.32■□□□□ 0.68
GRIA1P42261 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.32■□□□□ 0.68
GRIA1P42261 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.32■□□□□ 0.68
GRIA1P42261 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.32■□□□□ 0.68
GRIA1P42261 AC110285.5-201ENST00000611501 352 ntBASIC19.32■□□□□ 0.68
GRIA1P42261 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GRIA1P42261 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GRIA1P42261 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GRIA1P42261 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
GRIA1P42261 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GRIA1P42261 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GRIA1P42261 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GRIA1P42261 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.31■□□□□ 0.68
GRIA1P42261 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GRIA1P42261 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
GRIA1P42261 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GRIA1P42261 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GRIA1P42261 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GRIA1P42261 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GRIA1P42261 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GRIA1P42261 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GRIA1P42261 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.31■□□□□ 0.68
GRIA1P42261 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GRIA1P42261 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.31■□□□□ 0.68
GRIA1P42261 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.31■□□□□ 0.68
GRIA1P42261 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
GRIA1P42261 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
GRIA1P42261 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.31■□□□□ 0.68
GRIA1P42261 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.31■□□□□ 0.68
GRIA1P42261 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms