Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 NUDT16P1-203ENST00000513809 620 ntBASIC15.58■□□□□ 0.08
CEACAM3P40198 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.58■□□□□ 0.08
CEACAM3P40198 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.58■□□□□ 0.08
CEACAM3P40198 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CEACAM3P40198 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.58■□□□□ 0.08
CEACAM3P40198 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CEACAM3P40198 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CEACAM3P40198 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CEACAM3P40198 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.58■□□□□ 0.08
CEACAM3P40198 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.58■□□□□ 0.08
CEACAM3P40198 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CEACAM3P40198 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CEACAM3P40198 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.58■□□□□ 0.08
CEACAM3P40198 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.57■□□□□ 0.08
CEACAM3P40198 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CEACAM3P40198 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CEACAM3P40198 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.57■□□□□ 0.08
CEACAM3P40198 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.57■□□□□ 0.08
CEACAM3P40198 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.57■□□□□ 0.08
CEACAM3P40198 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.57■□□□□ 0.08
CEACAM3P40198 AC026471.5-201ENST00000615068 467 ntBASIC15.57■□□□□ 0.08
CEACAM3P40198 MIR6786-201ENST00000616843 113 ntBASIC15.57■□□□□ 0.08
CEACAM3P40198 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CEACAM3P40198 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.57■□□□□ 0.08
CEACAM3P40198 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.57■□□□□ 0.08
CEACAM3P40198 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.57■□□□□ 0.08
CEACAM3P40198 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CEACAM3P40198 LINC01465-201ENST00000408887 1940 ntBASIC15.56■□□□□ 0.08
CEACAM3P40198 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.56■□□□□ 0.08
CEACAM3P40198 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CEACAM3P40198 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CEACAM3P40198 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CEACAM3P40198 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CEACAM3P40198 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CEACAM3P40198 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CEACAM3P40198 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.56■□□□□ 0.08
CEACAM3P40198 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CEACAM3P40198 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CEACAM3P40198 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.56■□□□□ 0.08
CEACAM3P40198 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CEACAM3P40198 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.56■□□□□ 0.08
CEACAM3P40198 DGCR10-201ENST00000609839 495 ntBASIC15.56■□□□□ 0.08
CEACAM3P40198 AC011298.2-201ENST00000617989 482 ntBASIC15.56■□□□□ 0.08
CEACAM3P40198 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.56■□□□□ 0.08
CEACAM3P40198 RCC2P6-201ENST00000526625 1557 ntBASIC15.56■□□□□ 0.08
CEACAM3P40198 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.56■□□□□ 0.08
CEACAM3P40198 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.56■□□□□ 0.08
CEACAM3P40198 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.56■□□□□ 0.08
CEACAM3P40198 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.56■□□□□ 0.08
CEACAM3P40198 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CEACAM3P40198 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CEACAM3P40198 AC093484.2-201ENST00000580996 2166 ntBASIC15.56■□□□□ 0.08
CEACAM3P40198 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.56■□□□□ 0.08
CEACAM3P40198 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CEACAM3P40198 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CEACAM3P40198 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CEACAM3P40198 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CEACAM3P40198 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CEACAM3P40198 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CEACAM3P40198 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CEACAM3P40198 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.55■□□□□ 0.08
CEACAM3P40198 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.55■□□□□ 0.08
CEACAM3P40198 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.55■□□□□ 0.08
CEACAM3P40198 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CEACAM3P40198 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.55■□□□□ 0.08
CEACAM3P40198 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.55■□□□□ 0.08
CEACAM3P40198 Z85996.1-201ENST00000494644 937 ntBASIC15.55■□□□□ 0.08
CEACAM3P40198 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.55■□□□□ 0.08
CEACAM3P40198 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.55■□□□□ 0.08
CEACAM3P40198 AC066615.1-201ENST00000640911 628 ntBASIC15.55■□□□□ 0.08
CEACAM3P40198 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CEACAM3P40198 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms