Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24■■□□□ 1.43
RFC4P35249 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.99■■□□□ 1.43
RFC4P35249 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.99■■□□□ 1.43
RFC4P35249 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.99■■□□□ 1.43
RFC4P35249 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RFC4P35249 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.99■■□□□ 1.43
RFC4P35249 MIR662-201ENST00000384847 95 ntBASIC23.99■■□□□ 1.43
RFC4P35249 AL022342.1-201ENST00000400363 863 ntBASIC23.99■■□□□ 1.43
RFC4P35249 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.99■■□□□ 1.43
RFC4P35249 LINC00265-3P-201ENST00000447588 903 ntBASIC23.99■■□□□ 1.43
RFC4P35249 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.99■■□□□ 1.43
RFC4P35249 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.99■■□□□ 1.43
RFC4P35249 TPSP2-201ENST00000561760 610 ntBASIC23.99■■□□□ 1.43
RFC4P35249 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.99■■□□□ 1.43
RFC4P35249 AL136038.4-201ENST00000603606 1261 ntBASIC23.99■■□□□ 1.43
RFC4P35249 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RFC4P35249 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.99■■□□□ 1.43
RFC4P35249 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RFC4P35249 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
RFC4P35249 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFC4P35249 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFC4P35249 AL512408.1-201ENST00000569378 2000 ntBASIC23.98■■□□□ 1.43
RFC4P35249 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RFC4P35249 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFC4P35249 AL391807.1-203ENST00000604392 2365 ntBASIC23.98■■□□□ 1.43
RFC4P35249 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFC4P35249 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFC4P35249 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RFC4P35249 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.98■■□□□ 1.43
RFC4P35249 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.98■■□□□ 1.43
RFC4P35249 DRAXINP1-201ENST00000437611 948 ntBASIC23.98■■□□□ 1.43
RFC4P35249 MCCD1P1-208ENST00000445732 328 ntBASIC23.98■■□□□ 1.43
RFC4P35249 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.98■■□□□ 1.43
RFC4P35249 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.98■■□□□ 1.43
RFC4P35249 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.98■■□□□ 1.43
RFC4P35249 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RFC4P35249 LINC01711-201ENST00000598340 967 ntBASIC23.98■■□□□ 1.43
RFC4P35249 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
RFC4P35249 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFC4P35249 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.97■■□□□ 1.43
RFC4P35249 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFC4P35249 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.97■■□□□ 1.43
RFC4P35249 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFC4P35249 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFC4P35249 ZNF815P-204ENST00000434898 1737 ntBASIC23.97■■□□□ 1.43
RFC4P35249 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFC4P35249 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23.97■■□□□ 1.43
RFC4P35249 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RFC4P35249 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.97■■□□□ 1.43
RFC4P35249 AC023511.2-201ENST00000618803 211 ntBASIC23.97■■□□□ 1.43
RFC4P35249 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RFC4P35249 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RFC4P35249 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFC4P35249 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RFC4P35249 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
RFC4P35249 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.96■■□□□ 1.43
RFC4P35249 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.96■■□□□ 1.43
RFC4P35249 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.96■■□□□ 1.43
RFC4P35249 AC079781.3-201ENST00000449110 356 ntBASIC23.96■■□□□ 1.43
RFC4P35249 FOSL1P1-201ENST00000511041 816 ntBASIC23.96■■□□□ 1.43
RFC4P35249 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
RFC4P35249 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.96■■□□□ 1.43
RFC4P35249 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.96■■□□□ 1.43
RFC4P35249 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 AC112497.1-201ENST00000624824 639 ntBASIC23.96■■□□□ 1.43
RFC4P35249 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.96■■□□□ 1.43
RFC4P35249 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.96■■□□□ 1.43
RFC4P35249 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFC4P35249 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RFC4P35249 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.95■■□□□ 1.43
RFC4P35249 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RFC4P35249 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.95■■□□□ 1.42
RFC4P35249 AC073314.1-201ENST00000568729 2216 ntBASIC23.95■■□□□ 1.42
RFC4P35249 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFC4P35249 AL391422.3-201ENST00000603791 2761 ntBASIC23.95■■□□□ 1.42
RFC4P35249 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RFC4P35249 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RFC4P35249 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RFC4P35249 RNF126P1-202ENST00000569893 925 ntBASIC23.95■■□□□ 1.42
RFC4P35249 MIR3917-201ENST00000580971 93 ntBASIC23.95■■□□□ 1.42
RFC4P35249 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms