Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.05□□□□□ -0.16
CKS2P33552 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.05□□□□□ -0.16
CKS2P33552 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.05□□□□□ -0.16
CKS2P33552 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.05□□□□□ -0.16
CKS2P33552 IRX1P1-201ENST00000438849 1838 ntBASIC14.05□□□□□ -0.16
CKS2P33552 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CKS2P33552 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CKS2P33552 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 RASA4CP-201ENST00000424092 1398 ntBASIC14.05□□□□□ -0.16
CKS2P33552 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.05□□□□□ -0.16
CKS2P33552 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.05□□□□□ -0.16
CKS2P33552 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.05□□□□□ -0.16
CKS2P33552 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.05□□□□□ -0.16
CKS2P33552 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CKS2P33552 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CKS2P33552 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.04□□□□□ -0.16
CKS2P33552 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 ABALON-201ENST00000629058 1903 ntBASIC14.04□□□□□ -0.16
CKS2P33552 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CKS2P33552 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.04□□□□□ -0.16
CKS2P33552 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.04□□□□□ -0.16
CKS2P33552 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.04□□□□□ -0.16
CKS2P33552 SLC7A5P1-201ENST00000568957 537 ntBASIC14.04□□□□□ -0.16
CKS2P33552 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.04□□□□□ -0.16
CKS2P33552 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 CYP21A1P-202ENST00000354927 1481 ntBASIC14.04□□□□□ -0.16
CKS2P33552 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.04□□□□□ -0.16
CKS2P33552 MKRN4P-201ENST00000444706 1521 ntBASIC14.04□□□□□ -0.16
CKS2P33552 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.04□□□□□ -0.16
CKS2P33552 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.04□□□□□ -0.16
CKS2P33552 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CKS2P33552 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CKS2P33552 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CKS2P33552 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CKS2P33552 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CKS2P33552 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CKS2P33552 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CKS2P33552 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.03□□□□□ -0.16
CKS2P33552 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CKS2P33552 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.03□□□□□ -0.16
CKS2P33552 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CKS2P33552 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.03□□□□□ -0.16
CKS2P33552 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CKS2P33552 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.03□□□□□ -0.16
CKS2P33552 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CKS2P33552 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.03□□□□□ -0.16
CKS2P33552 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.03□□□□□ -0.16
CKS2P33552 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.03□□□□□ -0.16
CKS2P33552 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.03□□□□□ -0.16
CKS2P33552 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CKS2P33552 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CKS2P33552 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CKS2P33552 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.02□□□□□ -0.16
CKS2P33552 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CKS2P33552 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CKS2P33552 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CKS2P33552 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CKS2P33552 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CKS2P33552 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.02□□□□□ -0.16
CKS2P33552 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.02□□□□□ -0.16
CKS2P33552 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CKS2P33552 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
CKS2P33552 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CKS2P33552 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms