Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPN3P20807 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN3P20807 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN3P20807 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CAPN3P20807 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CAPN3P20807 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN3P20807 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CAPN3P20807 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPN3P20807 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN3P20807 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN3P20807 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN3P20807 AC026366.1-201ENST00000488803 879 ntBASIC18.35■□□□□ 0.53
CAPN3P20807 AC073912.3-201ENST00000624414 853 ntBASIC18.35■□□□□ 0.53
CAPN3P20807 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN3P20807 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CAPN3P20807 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN3P20807 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.35■□□□□ 0.53
CAPN3P20807 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN3P20807 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN3P20807 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN3P20807 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CAPN3P20807 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CAPN3P20807 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.34■□□□□ 0.53
CAPN3P20807 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN3P20807 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPN3P20807 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 FAM210CP-201ENST00000445714 574 ntBASIC18.34■□□□□ 0.53
CAPN3P20807 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPN3P20807 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.34■□□□□ 0.53
CAPN3P20807 AL354751.1-201ENST00000412768 1863 ntBASIC18.34■□□□□ 0.53
CAPN3P20807 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CAPN3P20807 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.34■□□□□ 0.53
CAPN3P20807 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.34■□□□□ 0.53
CAPN3P20807 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN3P20807 AL133373.2-201ENST00000623187 2828 ntBASIC18.34■□□□□ 0.53
CAPN3P20807 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN3P20807 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN3P20807 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN3P20807 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN3P20807 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN3P20807 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN3P20807 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN3P20807 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.33■□□□□ 0.53
CAPN3P20807 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.33■□□□□ 0.53
CAPN3P20807 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN3P20807 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN3P20807 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN3P20807 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN3P20807 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.33■□□□□ 0.52
CAPN3P20807 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN3P20807 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPN3P20807 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPN3P20807 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN3P20807 AC091874.3-201ENST00000512672 1195 ntBASIC18.33■□□□□ 0.52
CAPN3P20807 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPN3P20807 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPN3P20807 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN3P20807 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN3P20807 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CAPN3P20807 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN3P20807 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CAPN3P20807 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CAPN3P20807 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CAPN3P20807 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPN3P20807 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CAPN3P20807 KRT8P8-201ENST00000434750 1448 ntBASIC18.32■□□□□ 0.52
CAPN3P20807 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPN3P20807 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 AC020763.4-201ENST00000623414 4170 ntBASIC18.32■□□□□ 0.52
CAPN3P20807 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CAPN3P20807 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CAPN3P20807 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN3P20807 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CAPN3P20807 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN3P20807 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.32■□□□□ 0.52
CAPN3P20807 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN3P20807 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN3P20807 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN3P20807 AC006557.6-201ENST00000623071 864 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms