Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 AC083880.1-201ENST00000608266 535 ntBASIC17.73■□□□□ 0.43
TNFRSF1BP20333 AC120498.8-201ENST00000614275 531 ntBASIC17.73■□□□□ 0.43
TNFRSF1BP20333 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF1BP20333 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 AC135050.7-201ENST00000624508 2218 ntBASIC17.72■□□□□ 0.43
TNFRSF1BP20333 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 NCF1B-203ENST00000435988 1254 ntBASIC17.72■□□□□ 0.43
TNFRSF1BP20333 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.72■□□□□ 0.43
TNFRSF1BP20333 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 AL138781.1-201ENST00000566567 1274 ntBASIC17.72■□□□□ 0.43
TNFRSF1BP20333 SOX15-203ENST00000570788 1093 ntBASIC17.72■□□□□ 0.43
TNFRSF1BP20333 MIR4758-201ENST00000577688 71 ntBASIC17.72■□□□□ 0.43
TNFRSF1BP20333 AC060766.5-201ENST00000590539 871 ntBASIC17.72■□□□□ 0.43
TNFRSF1BP20333 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 FEM1AP3-201ENST00000403722 1741 ntBASIC17.72■□□□□ 0.43
TNFRSF1BP20333 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF1BP20333 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 AL133373.2-201ENST00000623187 2828 ntBASIC17.71■□□□□ 0.43
TNFRSF1BP20333 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 TUBB8P6-201ENST00000436895 1288 ntBASIC17.71■□□□□ 0.43
TNFRSF1BP20333 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.71■□□□□ 0.43
TNFRSF1BP20333 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.71■□□□□ 0.43
TNFRSF1BP20333 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF1BP20333 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TNFRSF1BP20333 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
TNFRSF1BP20333 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms