Protein–RNA interactions for Protein: P20061

TCN1, Transcobalamin-1, humanhuman

Predicted RBP Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1P20061 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.32■□□□□ 0.52
TCN1P20061 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TCN1P20061 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCN1P20061 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCN1P20061 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCN1P20061 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCN1P20061 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCN1P20061 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TCN1P20061 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.32■□□□□ 0.52
TCN1P20061 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.32■□□□□ 0.52
TCN1P20061 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
TCN1P20061 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.31■□□□□ 0.52
TCN1P20061 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.31■□□□□ 0.52
TCN1P20061 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TCN1P20061 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.31■□□□□ 0.52
TCN1P20061 AC007322.4-201ENST00000509611 723 ntBASIC18.31■□□□□ 0.52
TCN1P20061 AC023632.3-201ENST00000521633 145 ntBASIC18.31■□□□□ 0.52
TCN1P20061 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.31■□□□□ 0.52
TCN1P20061 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
TCN1P20061 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.31■□□□□ 0.52
TCN1P20061 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TCN1P20061 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TCN1P20061 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.31■□□□□ 0.52
TCN1P20061 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TCN1P20061 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TCN1P20061 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.3■□□□□ 0.52
TCN1P20061 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.3■□□□□ 0.52
TCN1P20061 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 SDHAP1-207ENST00000440850 2000 ntBASIC18.3■□□□□ 0.52
TCN1P20061 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TCN1P20061 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.3■□□□□ 0.52
TCN1P20061 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.3■□□□□ 0.52
TCN1P20061 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.3■□□□□ 0.52
TCN1P20061 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.3■□□□□ 0.52
TCN1P20061 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TCN1P20061 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.3■□□□□ 0.52
TCN1P20061 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TCN1P20061 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
TCN1P20061 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.3■□□□□ 0.52
TCN1P20061 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TCN1P20061 AC116351.2-201ENST00000606540 1585 ntBASIC18.3■□□□□ 0.52
TCN1P20061 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TCN1P20061 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCN1P20061 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCN1P20061 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TCN1P20061 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TCN1P20061 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.29■□□□□ 0.52
TCN1P20061 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCN1P20061 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCN1P20061 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.29■□□□□ 0.52
TCN1P20061 AL355472.2-201ENST00000422958 438 ntBASIC18.29■□□□□ 0.52
TCN1P20061 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.29■□□□□ 0.52
TCN1P20061 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TCN1P20061 AC012313.1-201ENST00000593393 3059 ntBASIC18.29■□□□□ 0.52
TCN1P20061 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCN1P20061 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCN1P20061 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TCN1P20061 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.29■□□□□ 0.52
TCN1P20061 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.29■□□□□ 0.52
TCN1P20061 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TCN1P20061 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.29■□□□□ 0.52
TCN1P20061 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms