Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
ATF1P18846 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATF1P18846 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ATF1P18846 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATF1P18846 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATF1P18846 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ATF1P18846 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATF1P18846 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.75■□□□□ 0.27
ATF1P18846 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ATF1P18846 AC092118.2-201ENST00000613495 667 ntBASIC16.75■□□□□ 0.27
ATF1P18846 AC006557.6-201ENST00000623071 864 ntBASIC16.75■□□□□ 0.27
ATF1P18846 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATF1P18846 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.75■□□□□ 0.27
ATF1P18846 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.75■□□□□ 0.27
ATF1P18846 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.75■□□□□ 0.27
ATF1P18846 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ATF1P18846 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.75■□□□□ 0.27
ATF1P18846 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 IRX1P1-201ENST00000438849 1838 ntBASIC16.75■□□□□ 0.27
ATF1P18846 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF1P18846 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATF1P18846 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATF1P18846 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.74■□□□□ 0.27
ATF1P18846 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ATF1P18846 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATF1P18846 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.74■□□□□ 0.27
ATF1P18846 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.74■□□□□ 0.27
ATF1P18846 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.74■□□□□ 0.27
ATF1P18846 AC006970.2-201ENST00000450065 779 ntBASIC16.74■□□□□ 0.27
ATF1P18846 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.74■□□□□ 0.27
ATF1P18846 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.74■□□□□ 0.27
ATF1P18846 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ATF1P18846 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.74■□□□□ 0.27
ATF1P18846 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ATF1P18846 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ATF1P18846 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
ATF1P18846 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF1P18846 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.74■□□□□ 0.27
ATF1P18846 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.74■□□□□ 0.27
ATF1P18846 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.74■□□□□ 0.27
ATF1P18846 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.73■□□□□ 0.27
ATF1P18846 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF1P18846 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF1P18846 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATF1P18846 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.73■□□□□ 0.27
ATF1P18846 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF1P18846 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF1P18846 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.73■□□□□ 0.27
ATF1P18846 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.73■□□□□ 0.27
ATF1P18846 RPS2P52-201ENST00000469610 820 ntBASIC16.73■□□□□ 0.27
ATF1P18846 AC091874.3-201ENST00000512672 1195 ntBASIC16.73■□□□□ 0.27
ATF1P18846 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.73■□□□□ 0.27
ATF1P18846 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.73■□□□□ 0.27
ATF1P18846 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.73■□□□□ 0.27
ATF1P18846 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATF1P18846 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATF1P18846 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.73■□□□□ 0.27
ATF1P18846 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.73■□□□□ 0.27
ATF1P18846 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF1P18846 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATF1P18846 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF1P18846 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
ATF1P18846 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATF1P18846 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATF1P18846 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
ATF1P18846 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms