Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VCLP18206 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCLP18206 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VCLP18206 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VCLP18206 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VCLP18206 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCLP18206 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VCLP18206 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
VCLP18206 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.17■□□□□ 0.66
VCLP18206 NIFKP9-201ENST00000419265 221 ntBASIC19.17■□□□□ 0.66
VCLP18206 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCLP18206 KSR1P1-201ENST00000446298 240 ntBASIC19.17■□□□□ 0.66
VCLP18206 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.17■□□□□ 0.66
VCLP18206 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VCLP18206 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.17■□□□□ 0.66
VCLP18206 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.17■□□□□ 0.66
VCLP18206 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
VCLP18206 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.17■□□□□ 0.66
VCLP18206 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.17■□□□□ 0.66
VCLP18206 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCLP18206 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VCLP18206 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
VCLP18206 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VCLP18206 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.16■□□□□ 0.66
VCLP18206 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCLP18206 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VCLP18206 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCLP18206 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCLP18206 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCLP18206 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VCLP18206 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.16■□□□□ 0.66
VCLP18206 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.16■□□□□ 0.66
VCLP18206 MIR4497-201ENST00000583208 89 ntBASIC19.16■□□□□ 0.66
VCLP18206 MIR4785-201ENST00000585005 73 ntBASIC19.16■□□□□ 0.66
VCLP18206 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.16■□□□□ 0.66
VCLP18206 KRT17P2-201ENST00000300992 1314 ntBASIC19.16■□□□□ 0.66
VCLP18206 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCLP18206 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCLP18206 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.16■□□□□ 0.66
VCLP18206 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VCLP18206 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.15■□□□□ 0.66
VCLP18206 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.15■□□□□ 0.66
VCLP18206 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VCLP18206 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VCLP18206 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
VCLP18206 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.15■□□□□ 0.66
VCLP18206 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.15■□□□□ 0.66
VCLP18206 SNORA78-201ENST00000459373 127 ntBASIC19.15■□□□□ 0.66
VCLP18206 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.15■□□□□ 0.66
VCLP18206 CD177P1-201ENST00000606252 935 ntBASIC19.15■□□□□ 0.66
VCLP18206 AC113410.3-201ENST00000623366 203 ntBASIC19.15■□□□□ 0.66
VCLP18206 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.15■□□□□ 0.66
VCLP18206 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.15■□□□□ 0.66
VCLP18206 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.15■□□□□ 0.66
VCLP18206 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VCLP18206 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VCLP18206 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VCLP18206 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VCLP18206 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.15■□□□□ 0.66
VCLP18206 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.15■□□□□ 0.66
VCLP18206 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VCLP18206 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
VCLP18206 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
VCLP18206 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.14■□□□□ 0.65
VCLP18206 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
VCLP18206 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.14■□□□□ 0.65
VCLP18206 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.14■□□□□ 0.65
VCLP18206 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.14■□□□□ 0.65
VCLP18206 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.14■□□□□ 0.65
VCLP18206 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
VCLP18206 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VCLP18206 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.14■□□□□ 0.65
VCLP18206 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VCLP18206 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.14■□□□□ 0.65
VCLP18206 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 KRT16P1-201ENST00000399124 1418 ntBASIC19.14■□□□□ 0.65
VCLP18206 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VCLP18206 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms