Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PRKCAP17252 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.64■□□□□ 0.41
PRKCAP17252 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.64■□□□□ 0.41
PRKCAP17252 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.64■□□□□ 0.41
PRKCAP17252 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.64■□□□□ 0.41
PRKCAP17252 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.64■□□□□ 0.41
PRKCAP17252 TMEM191A-211ENST00000637163 1067 ntBASIC17.64■□□□□ 0.41
PRKCAP17252 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRKCAP17252 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.64■□□□□ 0.41
PRKCAP17252 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PRKCAP17252 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRKCAP17252 AL049812.1-201ENST00000432563 2267 ntBASIC17.64■□□□□ 0.41
PRKCAP17252 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.64■□□□□ 0.41
PRKCAP17252 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.63■□□□□ 0.41
PRKCAP17252 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PRKCAP17252 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.63■□□□□ 0.41
PRKCAP17252 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PRKCAP17252 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.63■□□□□ 0.41
PRKCAP17252 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.63■□□□□ 0.41
PRKCAP17252 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.63■□□□□ 0.41
PRKCAP17252 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
PRKCAP17252 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.63■□□□□ 0.41
PRKCAP17252 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 AC093484.2-201ENST00000580996 2166 ntBASIC17.63■□□□□ 0.41
PRKCAP17252 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.63■□□□□ 0.41
PRKCAP17252 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PRKCAP17252 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRKCAP17252 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.63■□□□□ 0.41
PRKCAP17252 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PRKCAP17252 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PRKCAP17252 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.62■□□□□ 0.41
PRKCAP17252 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PRKCAP17252 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PRKCAP17252 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PRKCAP17252 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.62■□□□□ 0.41
PRKCAP17252 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PRKCAP17252 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PRKCAP17252 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.62■□□□□ 0.41
PRKCAP17252 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PRKCAP17252 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PRKCAP17252 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.62■□□□□ 0.41
PRKCAP17252 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 AL158047.1-201ENST00000445918 881 ntBASIC17.62■□□□□ 0.41
PRKCAP17252 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.62■□□□□ 0.41
PRKCAP17252 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PRKCAP17252 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.62■□□□□ 0.41
PRKCAP17252 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.62■□□□□ 0.41
PRKCAP17252 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.62■□□□□ 0.41
PRKCAP17252 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PRKCAP17252 AL133373.2-201ENST00000623187 2828 ntBASIC17.62■□□□□ 0.41
PRKCAP17252 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
PRKCAP17252 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PRKCAP17252 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRKCAP17252 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PRKCAP17252 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PRKCAP17252 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.61■□□□□ 0.41
PRKCAP17252 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKCAP17252 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKCAP17252 ZNF815P-204ENST00000434898 1737 ntBASIC17.61■□□□□ 0.41
PRKCAP17252 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKCAP17252 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKCAP17252 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PRKCAP17252 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKCAP17252 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKCAP17252 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.61■□□□□ 0.41
PRKCAP17252 AC005332.7-201ENST00000614046 2005 ntBASIC17.61■□□□□ 0.41
PRKCAP17252 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PRKCAP17252 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKCAP17252 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKCAP17252 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms