Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC130P13994 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC130P13994 AC141586.3-201ENST00000562166 1838 ntBASIC20.21■□□□□ 0.83
CCDC130P13994 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC130P13994 INGX-201ENST00000359239 846 ntBASIC20.21■□□□□ 0.83
CCDC130P13994 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.21■□□□□ 0.83
CCDC130P13994 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC130P13994 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC130P13994 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC130P13994 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC130P13994 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC130P13994 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC130P13994 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC130P13994 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC130P13994 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC130P13994 LINC01568-207ENST00000641790 1380 ntBASIC20.21■□□□□ 0.83
CCDC130P13994 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC130P13994 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC130P13994 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC130P13994 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC130P13994 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
CCDC130P13994 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC130P13994 C2orf69P3-201ENST00000565542 1120 ntBASIC20.2■□□□□ 0.82
CCDC130P13994 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC130P13994 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
CCDC130P13994 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CCDC130P13994 AC012306.2-201ENST00000609350 630 ntBASIC20.2■□□□□ 0.82
CCDC130P13994 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC130P13994 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CCDC130P13994 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC130P13994 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC130P13994 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC130P13994 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC130P13994 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC130P13994 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC130P13994 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC130P13994 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC130P13994 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 AC097493.4-201ENST00000641197 219 ntBASIC20.19■□□□□ 0.82
CCDC130P13994 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC130P13994 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
CCDC130P13994 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC130P13994 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC130P13994 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC130P13994 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC130P13994 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC130P13994 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 IRX1P1-201ENST00000438849 1838 ntBASIC20.18■□□□□ 0.82
CCDC130P13994 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC130P13994 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC130P13994 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC130P13994 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.18■□□□□ 0.82
CCDC130P13994 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC130P13994 AC145285.6-201ENST00000604632 637 ntBASIC20.18■□□□□ 0.82
CCDC130P13994 LINC01023-201ENST00000606054 436 ntBASIC20.18■□□□□ 0.82
CCDC130P13994 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC130P13994 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC130P13994 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC130P13994 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC130P13994 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC130P13994 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC130P13994 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms