Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC32.75■■■□□ 2.83
CFTRP13569 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC32.75■■■□□ 2.83
CFTRP13569 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC32.75■■■□□ 2.83
CFTRP13569 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC32.75■■■□□ 2.83
CFTRP13569 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC32.75■■■□□ 2.83
CFTRP13569 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC32.74■■■□□ 2.83
CFTRP13569 AC090616.6-201ENST00000582640 721 ntBASIC32.74■■■□□ 2.83
CFTRP13569 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC32.74■■■□□ 2.83
CFTRP13569 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CFTRP13569 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
CFTRP13569 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CFTRP13569 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CFTRP13569 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC32.74■■■□□ 2.83
CFTRP13569 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC32.74■■■□□ 2.83
CFTRP13569 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
CFTRP13569 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
CFTRP13569 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
CFTRP13569 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
CFTRP13569 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC32.73■■■□□ 2.83
CFTRP13569 SLC25A1P1-201ENST00000528351 927 ntBASIC32.73■■■□□ 2.83
CFTRP13569 TPM1-218ENST00000559281 851 ntTSL 5 BASIC32.73■■■□□ 2.83
CFTRP13569 LINC01711-201ENST00000598340 967 ntBASIC32.73■■■□□ 2.83
CFTRP13569 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 AC012676.1-201ENST00000574705 1949 ntBASIC32.73■■■□□ 2.83
CFTRP13569 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CFTRP13569 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC32.72■■■□□ 2.83
CFTRP13569 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFTRP13569 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFTRP13569 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFTRP13569 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFTRP13569 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC32.72■■■□□ 2.83
CFTRP13569 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC32.72■■■□□ 2.83
CFTRP13569 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC32.72■■■□□ 2.83
CFTRP13569 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC32.72■■■□□ 2.83
CFTRP13569 FICD-205ENST00000552758 603 ntTSL 2 BASIC32.72■■■□□ 2.83
CFTRP13569 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC32.72■■■□□ 2.83
CFTRP13569 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFTRP13569 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFTRP13569 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC32.71■■■□□ 2.83
CFTRP13569 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC32.71■■■□□ 2.83
CFTRP13569 DET1-207ENST00000564406 2315 ntTSL 2 BASIC32.71■■■□□ 2.83
CFTRP13569 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CFTRP13569 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC32.71■■■□□ 2.83
CFTRP13569 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CFTRP13569 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CFTRP13569 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CFTRP13569 AL590627.1-203ENST00000421194 1026 ntBASIC32.71■■■□□ 2.83
CFTRP13569 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC32.71■■■□□ 2.83
CFTRP13569 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC32.71■■■□□ 2.83
CFTRP13569 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CFTRP13569 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC32.71■■■□□ 2.83
CFTRP13569 AC099336.1-202ENST00000602961 463 ntBASIC32.71■■■□□ 2.83
CFTRP13569 IGHV3OR16-7-201ENST00000604106 360 ntBASIC32.71■■■□□ 2.83
CFTRP13569 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC32.71■■■□□ 2.83
CFTRP13569 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CFTRP13569 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC32.71■■■□□ 2.83
CFTRP13569 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CFTRP13569 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC32.71■■■□□ 2.83
CFTRP13569 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
CFTRP13569 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CFTRP13569 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC32.7■■■□□ 2.83
CFTRP13569 DFFB-203ENST00000341385 572 ntTSL 5 BASIC32.7■■■□□ 2.83
CFTRP13569 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
CFTRP13569 CDV3-207ENST00000508481 661 ntTSL 3 BASIC32.7■■■□□ 2.83
CFTRP13569 HOXB1-202ENST00000577092 1414 ntBASIC32.7■■■□□ 2.83
CFTRP13569 SDHAP1-207ENST00000440850 2000 ntBASIC32.7■■■□□ 2.83
CFTRP13569 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC32.7■■■□□ 2.82
CFTRP13569 IL9RP2-201ENST00000423948 1312 ntBASIC32.7■■■□□ 2.82
CFTRP13569 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
CFTRP13569 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
CFTRP13569 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
CFTRP13569 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC32.69■■■□□ 2.82
CFTRP13569 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CFTRP13569 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CFTRP13569 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
CFTRP13569 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
CFTRP13569 KRT18P13-201ENST00000400056 1290 ntBASIC32.69■■■□□ 2.82
CFTRP13569 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
CFTRP13569 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC32.69■■■□□ 2.82
CFTRP13569 AP005901.3-202ENST00000581653 237 ntBASIC32.69■■■□□ 2.82
CFTRP13569 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC32.69■■■□□ 2.82
CFTRP13569 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CFTRP13569 AC133561.1-201ENST00000568600 2415 ntBASIC32.69■■■□□ 2.82
CFTRP13569 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CFTRP13569 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
CFTRP13569 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CFTRP13569 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CFTRP13569 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC32.68■■■□□ 2.82
CFTRP13569 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CFTRP13569 AF238378.1-201ENST00000526806 358 ntBASIC32.68■■■□□ 2.82
CFTRP13569 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC32.68■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms