Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PEPDP12955 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PEPDP12955 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.65■□□□□ 0.42
PEPDP12955 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.65■□□□□ 0.42
PEPDP12955 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PEPDP12955 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PEPDP12955 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.65■□□□□ 0.42
PEPDP12955 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.65■□□□□ 0.42
PEPDP12955 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PEPDP12955 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.65■□□□□ 0.42
PEPDP12955 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.65■□□□□ 0.42
PEPDP12955 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 AP002982.1-201ENST00000492365 877 ntBASIC17.65■□□□□ 0.42
PEPDP12955 AF186192.3-201ENST00000583427 947 ntBASIC17.65■□□□□ 0.42
PEPDP12955 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.65■□□□□ 0.42
PEPDP12955 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.65■□□□□ 0.42
PEPDP12955 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.65■□□□□ 0.42
PEPDP12955 AL353708.3-201ENST00000610272 989 ntBASIC17.65■□□□□ 0.42
PEPDP12955 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.65■□□□□ 0.42
PEPDP12955 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.65■□□□□ 0.42
PEPDP12955 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PEPDP12955 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
PEPDP12955 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PEPDP12955 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PEPDP12955 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PEPDP12955 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PEPDP12955 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.64■□□□□ 0.41
PEPDP12955 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PEPDP12955 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.64■□□□□ 0.41
PEPDP12955 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.64■□□□□ 0.41
PEPDP12955 MIR4497-201ENST00000583208 89 ntBASIC17.64■□□□□ 0.41
PEPDP12955 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.64■□□□□ 0.41
PEPDP12955 AC073195.1-201ENST00000607241 877 ntBASIC17.64■□□□□ 0.41
PEPDP12955 AC120498.9-201ENST00000339021 3867 ntBASIC17.64■□□□□ 0.41
PEPDP12955 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.64■□□□□ 0.41
PEPDP12955 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.64■□□□□ 0.41
PEPDP12955 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.64■□□□□ 0.41
PEPDP12955 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.64■□□□□ 0.41
PEPDP12955 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PEPDP12955 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PEPDP12955 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 LETM1P2-201ENST00000597330 2178 ntBASIC17.63■□□□□ 0.41
PEPDP12955 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PEPDP12955 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 LINC01465-201ENST00000408887 1940 ntBASIC17.63■□□□□ 0.41
PEPDP12955 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PEPDP12955 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 AL596275.1-201ENST00000423464 877 ntBASIC17.63■□□□□ 0.41
PEPDP12955 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.63■□□□□ 0.41
PEPDP12955 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.63■□□□□ 0.41
PEPDP12955 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PEPDP12955 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PEPDP12955 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 AC026471.1-201ENST00000564629 3026 ntBASIC17.63■□□□□ 0.41
PEPDP12955 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PEPDP12955 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.63■□□□□ 0.41
PEPDP12955 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PEPDP12955 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms