Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRM1P11229 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRM1P11229 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRM1P11229 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.97■□□□□ 0.79
CHRM1P11229 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRM1P11229 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRM1P11229 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRM1P11229 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.96■□□□□ 0.79
CHRM1P11229 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRM1P11229 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRM1P11229 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CHRM1P11229 MIR3908-201ENST00000579798 126 ntBASIC19.96■□□□□ 0.79
CHRM1P11229 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CHRM1P11229 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRM1P11229 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRM1P11229 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHRM1P11229 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CHRM1P11229 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRM1P11229 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHRM1P11229 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRM1P11229 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRM1P11229 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 FSCN1P1-201ENST00000568912 1481 ntBASIC19.95■□□□□ 0.78
CHRM1P11229 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.95■□□□□ 0.78
CHRM1P11229 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHRM1P11229 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRM1P11229 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.95■□□□□ 0.78
CHRM1P11229 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.95■□□□□ 0.78
CHRM1P11229 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHRM1P11229 KRT18P22-201ENST00000402024 1347 ntBASIC19.95■□□□□ 0.78
CHRM1P11229 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.95■□□□□ 0.78
CHRM1P11229 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHRM1P11229 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRM1P11229 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRM1P11229 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRM1P11229 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRM1P11229 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRM1P11229 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRM1P11229 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.94■□□□□ 0.78
CHRM1P11229 AC008040.2-201ENST00000461049 708 ntBASIC19.94■□□□□ 0.78
CHRM1P11229 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRM1P11229 AC010203.1-204ENST00000548782 407 ntBASIC19.94■□□□□ 0.78
CHRM1P11229 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRM1P11229 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRM1P11229 DGCR10-201ENST00000609839 495 ntBASIC19.94■□□□□ 0.78
CHRM1P11229 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHRM1P11229 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRM1P11229 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRM1P11229 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRM1P11229 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.94■□□□□ 0.78
CHRM1P11229 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRM1P11229 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRM1P11229 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHRM1P11229 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRM1P11229 AC141586.5-201ENST00000624546 2050 ntBASIC19.93■□□□□ 0.78
CHRM1P11229 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.93■□□□□ 0.78
CHRM1P11229 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CHRM1P11229 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHRM1P11229 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.93■□□□□ 0.78
CHRM1P11229 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRM1P11229 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC19.93■□□□□ 0.78
CHRM1P11229 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRM1P11229 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHRM1P11229 KRT16P6-202ENST00000425692 1426 ntBASIC19.93■□□□□ 0.78
CHRM1P11229 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms