Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TSPY23P-201ENST00000440136 739 ntBASIC17.32■□□□□ 0.36
FREM3P0C091 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.32■□□□□ 0.36
FREM3P0C091 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.32■□□□□ 0.36
FREM3P0C091 AC128688.1-201ENST00000487626 519 ntBASIC17.32■□□□□ 0.36
FREM3P0C091 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.32■□□□□ 0.36
FREM3P0C091 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FREM3P0C091 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FREM3P0C091 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
FREM3P0C091 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
FREM3P0C091 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FREM3P0C091 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 AC098818.2-201ENST00000564925 2320 ntBASIC17.32■□□□□ 0.36
FREM3P0C091 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 HMGA1P5-201ENST00000412453 271 ntBASIC17.32■□□□□ 0.36
FREM3P0C091 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.32■□□□□ 0.36
FREM3P0C091 CA15P1-201ENST00000481698 905 ntBASIC17.32■□□□□ 0.36
FREM3P0C091 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.32■□□□□ 0.36
FREM3P0C091 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FREM3P0C091 AC036111.1-201ENST00000533973 1582 ntBASIC17.32■□□□□ 0.36
FREM3P0C091 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.32■□□□□ 0.36
FREM3P0C091 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM3P0C091 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM3P0C091 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FREM3P0C091 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM3P0C091 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.31■□□□□ 0.36
FREM3P0C091 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM3P0C091 TSPY17P-201ENST00000450329 467 ntBASIC17.31■□□□□ 0.36
FREM3P0C091 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.31■□□□□ 0.36
FREM3P0C091 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
FREM3P0C091 AL049597.2-201ENST00000565575 961 ntBASIC17.31■□□□□ 0.36
FREM3P0C091 AP005242.2-201ENST00000580065 1175 ntBASIC17.31■□□□□ 0.36
FREM3P0C091 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.31■□□□□ 0.36
FREM3P0C091 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM3P0C091 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM3P0C091 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
FREM3P0C091 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.31■□□□□ 0.36
FREM3P0C091 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.31■□□□□ 0.36
FREM3P0C091 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM3P0C091 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.31■□□□□ 0.36
FREM3P0C091 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FREM3P0C091 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 AK4P3-201ENST00000418260 669 ntBASIC17.3■□□□□ 0.36
FREM3P0C091 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM3P0C091 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.3■□□□□ 0.36
FREM3P0C091 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.3■□□□□ 0.36
FREM3P0C091 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM3P0C091 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM3P0C091 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.3■□□□□ 0.36
FREM3P0C091 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM3P0C091 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
FREM3P0C091 TERF1P1-201ENST00000311003 1181 ntBASIC17.3■□□□□ 0.36
FREM3P0C091 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FREM3P0C091 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM3P0C091 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.3■□□□□ 0.36
FREM3P0C091 NAPSB-206ENST00000562112 1266 ntBASIC17.3■□□□□ 0.36
FREM3P0C091 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
FREM3P0C091 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FREM3P0C091 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM3P0C091 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.3■□□□□ 0.36
FREM3P0C091 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM3P0C091 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM3P0C091 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FREM3P0C091 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms