Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM1P09493 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TPM1P09493 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM1P09493 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM1P09493 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TPM1P09493 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.01■□□□□ 0.95
TPM1P09493 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.01■□□□□ 0.95
TPM1P09493 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM1P09493 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.01■□□□□ 0.95
TPM1P09493 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
TPM1P09493 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TPM1P09493 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TPM1P09493 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TPM1P09493 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM1P09493 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.01■□□□□ 0.95
TPM1P09493 FP475955.4-201ENST00000623131 1990 ntBASIC21.01■□□□□ 0.95
TPM1P09493 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM1P09493 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM1P09493 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM1P09493 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM1P09493 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM1P09493 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21■□□□□ 0.95
TPM1P09493 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21■□□□□ 0.95
TPM1P09493 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21■□□□□ 0.95
TPM1P09493 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 PCDHB18P-201ENST00000524813 2368 ntBASIC21■□□□□ 0.95
TPM1P09493 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TPM1P09493 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21■□□□□ 0.95
TPM1P09493 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21■□□□□ 0.95
TPM1P09493 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21■□□□□ 0.95
TPM1P09493 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21■□□□□ 0.95
TPM1P09493 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21■□□□□ 0.95
TPM1P09493 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TPM1P09493 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM1P09493 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21■□□□□ 0.95
TPM1P09493 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TPM1P09493 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21■□□□□ 0.95
TPM1P09493 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM1P09493 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TPM1P09493 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.99■□□□□ 0.95
TPM1P09493 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 AC073210.2-201ENST00000430369 194 ntBASIC20.99■□□□□ 0.95
TPM1P09493 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
TPM1P09493 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 AC005181.1-201ENST00000604782 1256 ntBASIC20.99■□□□□ 0.95
TPM1P09493 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM1P09493 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM1P09493 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.98■□□□□ 0.95
TPM1P09493 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TPM1P09493 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TPM1P09493 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TPM1P09493 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TPM1P09493 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.98■□□□□ 0.95
TPM1P09493 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.98■□□□□ 0.95
TPM1P09493 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TPM1P09493 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.98■□□□□ 0.95
TPM1P09493 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
TPM1P09493 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.98■□□□□ 0.95
TPM1P09493 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM1P09493 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.97■□□□□ 0.95
TPM1P09493 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TPM1P09493 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.97■□□□□ 0.95
TPM1P09493 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TPM1P09493 AC104417.2-201ENST00000562989 1793 ntBASIC20.97■□□□□ 0.95
TPM1P09493 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.97■□□□□ 0.95
TPM1P09493 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TPM1P09493 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
TPM1P09493 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.97■□□□□ 0.95
TPM1P09493 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM1P09493 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms