Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.78■□□□□ 0.76
CD48P09326 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD48P09326 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.77■□□□□ 0.76
CD48P09326 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.77■□□□□ 0.76
CD48P09326 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD48P09326 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD48P09326 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD48P09326 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD48P09326 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD48P09326 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD48P09326 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.77■□□□□ 0.76
CD48P09326 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.77■□□□□ 0.76
CD48P09326 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.77■□□□□ 0.76
CD48P09326 AF186192.3-201ENST00000583427 947 ntBASIC19.77■□□□□ 0.76
CD48P09326 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD48P09326 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD48P09326 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.77■□□□□ 0.76
CD48P09326 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CD48P09326 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CD48P09326 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CD48P09326 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CD48P09326 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.76■□□□□ 0.75
CD48P09326 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
CD48P09326 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CD48P09326 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.76■□□□□ 0.75
CD48P09326 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 ABHD17AP1-201ENST00000358206 933 ntBASIC19.76■□□□□ 0.75
CD48P09326 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CD48P09326 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.76■□□□□ 0.75
CD48P09326 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.76■□□□□ 0.75
CD48P09326 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.76■□□□□ 0.75
CD48P09326 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.76■□□□□ 0.75
CD48P09326 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CD48P09326 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.76■□□□□ 0.75
CD48P09326 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD48P09326 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.76■□□□□ 0.75
CD48P09326 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.75■□□□□ 0.75
CD48P09326 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.75■□□□□ 0.75
CD48P09326 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CD48P09326 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CD48P09326 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.75■□□□□ 0.75
CD48P09326 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.75■□□□□ 0.75
CD48P09326 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CD48P09326 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.75■□□□□ 0.75
CD48P09326 KSR1P1-201ENST00000446298 240 ntBASIC19.75■□□□□ 0.75
CD48P09326 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.75■□□□□ 0.75
CD48P09326 AC142381.4-202ENST00000563973 229 ntBASIC19.75■□□□□ 0.75
CD48P09326 RARRES2P10-201ENST00000564312 460 ntBASIC19.75■□□□□ 0.75
CD48P09326 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CD48P09326 AC131212.4-201ENST00000623606 975 ntBASIC19.75■□□□□ 0.75
CD48P09326 CR392000.1-201ENST00000624770 1228 ntBASIC19.75■□□□□ 0.75
CD48P09326 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.75■□□□□ 0.75
CD48P09326 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.75■□□□□ 0.75
CD48P09326 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 KRT8P11-201ENST00000409686 1436 ntBASIC19.75■□□□□ 0.75
CD48P09326 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.75■□□□□ 0.75
CD48P09326 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD48P09326 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD48P09326 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.74■□□□□ 0.75
CD48P09326 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CD48P09326 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.74■□□□□ 0.75
CD48P09326 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.74■□□□□ 0.75
CD48P09326 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD48P09326 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD48P09326 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CD48P09326 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CD48P09326 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.74■□□□□ 0.75
CD48P09326 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CD48P09326 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.74■□□□□ 0.75
CD48P09326 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD48P09326 GCSHP5-201ENST00000443090 522 ntBASIC19.74■□□□□ 0.75
CD48P09326 AC008040.2-201ENST00000461049 708 ntBASIC19.74■□□□□ 0.75
CD48P09326 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CD48P09326 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.74■□□□□ 0.75
CD48P09326 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.74■□□□□ 0.75
CD48P09326 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD48P09326 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD48P09326 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CD48P09326 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms