Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ROS1P08922 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ROS1P08922 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
ROS1P08922 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ROS1P08922 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ROS1P08922 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.43■□□□□ 0.22
ROS1P08922 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ROS1P08922 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.43■□□□□ 0.22
ROS1P08922 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.43■□□□□ 0.22
ROS1P08922 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ROS1P08922 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.42■□□□□ 0.22
ROS1P08922 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
ROS1P08922 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.42■□□□□ 0.22
ROS1P08922 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.42■□□□□ 0.22
ROS1P08922 AC083849.1-201ENST00000615227 514 ntBASIC16.42■□□□□ 0.22
ROS1P08922 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.42■□□□□ 0.22
ROS1P08922 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
ROS1P08922 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
ROS1P08922 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.42■□□□□ 0.22
ROS1P08922 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ROS1P08922 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.42■□□□□ 0.22
ROS1P08922 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
ROS1P08922 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.42■□□□□ 0.22
ROS1P08922 KRT18P56-201ENST00000507275 550 ntBASIC16.42■□□□□ 0.22
ROS1P08922 PRSS44-201ENST00000515154 1146 ntBASIC16.42■□□□□ 0.22
ROS1P08922 AC140113.3-201ENST00000605663 199 ntBASIC16.42■□□□□ 0.22
ROS1P08922 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.42■□□□□ 0.22
ROS1P08922 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 AC005332.1-201ENST00000577698 1310 ntBASIC16.42■□□□□ 0.22
ROS1P08922 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ROS1P08922 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ROS1P08922 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.41■□□□□ 0.22
ROS1P08922 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.41■□□□□ 0.22
ROS1P08922 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.41■□□□□ 0.22
ROS1P08922 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.41■□□□□ 0.22
ROS1P08922 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 AL512604.3-201ENST00000569583 964 ntBASIC16.41■□□□□ 0.22
ROS1P08922 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.41■□□□□ 0.22
ROS1P08922 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.41■□□□□ 0.22
ROS1P08922 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.41■□□□□ 0.22
ROS1P08922 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ROS1P08922 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.41■□□□□ 0.22
ROS1P08922 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ROS1P08922 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ROS1P08922 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ROS1P08922 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.41■□□□□ 0.22
ROS1P08922 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.41■□□□□ 0.22
ROS1P08922 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.41■□□□□ 0.22
ROS1P08922 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.41■□□□□ 0.22
ROS1P08922 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.41■□□□□ 0.22
ROS1P08922 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.41■□□□□ 0.22
ROS1P08922 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.41■□□□□ 0.22
ROS1P08922 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
ROS1P08922 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ROS1P08922 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ROS1P08922 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.41■□□□□ 0.22
ROS1P08922 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ROS1P08922 SDHAP1-207ENST00000440850 2000 ntBASIC16.4■□□□□ 0.22
ROS1P08922 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ROS1P08922 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ROS1P08922 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ROS1P08922 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ROS1P08922 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.4■□□□□ 0.22
ROS1P08922 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.4■□□□□ 0.22
ROS1P08922 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ROS1P08922 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.4■□□□□ 0.22
ROS1P08922 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.4■□□□□ 0.22
ROS1P08922 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.4■□□□□ 0.22
ROS1P08922 CKBP1-201ENST00000565489 1086 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms