Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.44■□□□□ 0.38
P04436 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
P04436 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 TERF1P1-201ENST00000311003 1181 ntBASIC17.44■□□□□ 0.38
P04436 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 INGX-201ENST00000359239 846 ntBASIC17.44■□□□□ 0.38
P04436 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.44■□□□□ 0.38
P04436 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
P04436 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.44■□□□□ 0.38
P04436 AC007663.1-201ENST00000438948 1240 ntBASIC17.44■□□□□ 0.38
P04436 TSPY23P-201ENST00000440136 739 ntBASIC17.44■□□□□ 0.38
P04436 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.44■□□□□ 0.38
P04436 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.44■□□□□ 0.38
P04436 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.44■□□□□ 0.38
P04436 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.44■□□□□ 0.38
P04436 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.44■□□□□ 0.38
P04436 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
P04436 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.44■□□□□ 0.38
P04436 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
P04436 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
P04436 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.43■□□□□ 0.38
P04436 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
P04436 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.43■□□□□ 0.38
P04436 KRT18P57-201ENST00000443599 1254 ntBASIC17.43■□□□□ 0.38
P04436 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.43■□□□□ 0.38
P04436 FAM87A-204ENST00000613235 858 ntBASIC17.43■□□□□ 0.38
P04436 AL023803.3-201ENST00000615559 522 ntBASIC17.43■□□□□ 0.38
P04436 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 AC092338.2-201ENST00000568827 1415 ntBASIC17.43■□□□□ 0.38
P04436 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.43■□□□□ 0.38
P04436 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.43■□□□□ 0.38
P04436 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04436 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
P04436 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
P04436 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.42■□□□□ 0.38
P04436 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.42■□□□□ 0.38
P04436 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
P04436 MIR1224-201ENST00000408193 85 ntBASIC17.42■□□□□ 0.38
P04436 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.42■□□□□ 0.38
P04436 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.42■□□□□ 0.38
P04436 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
P04436 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
P04436 AL512604.3-201ENST00000569583 964 ntBASIC17.42■□□□□ 0.38
P04436 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
P04436 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.42■□□□□ 0.38
P04436 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.42■□□□□ 0.38
P04436 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.42■□□□□ 0.38
P04436 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.42■□□□□ 0.38
P04436 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04436 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
P04436 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.41■□□□□ 0.38
P04436 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.41■□□□□ 0.38
P04436 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04436 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
P04436 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms