Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.08■□□□□ 0.97
CD4P01730 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.08■□□□□ 0.97
CD4P01730 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD4P01730 AC092329.2-201ENST00000598402 547 ntBASIC21.08■□□□□ 0.97
CD4P01730 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.08■□□□□ 0.96
CD4P01730 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CD4P01730 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CD4P01730 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.08■□□□□ 0.96
CD4P01730 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CD4P01730 TCF3P1-201ENST00000423021 1937 ntBASIC21.08■□□□□ 0.96
CD4P01730 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.07■□□□□ 0.96
CD4P01730 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CD4P01730 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CD4P01730 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
CD4P01730 MIR3180-1-201ENST00000580374 94 ntBASIC21.07■□□□□ 0.96
CD4P01730 MIR3180-3-201ENST00000584616 94 ntBASIC21.07■□□□□ 0.96
CD4P01730 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CD4P01730 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CD4P01730 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CD4P01730 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CD4P01730 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CD4P01730 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CD4P01730 PRELID1P1-202ENST00000567272 903 ntBASIC21.06■□□□□ 0.96
CD4P01730 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.06■□□□□ 0.96
CD4P01730 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
CD4P01730 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CD4P01730 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.06■□□□□ 0.96
CD4P01730 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CD4P01730 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CD4P01730 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CD4P01730 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD4P01730 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CD4P01730 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CD4P01730 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CD4P01730 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.05■□□□□ 0.96
CD4P01730 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.05■□□□□ 0.96
CD4P01730 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.05■□□□□ 0.96
CD4P01730 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.05■□□□□ 0.96
CD4P01730 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CD4P01730 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.05■□□□□ 0.96
CD4P01730 AC016734.2-201ENST00000624325 1377 ntBASIC21.05■□□□□ 0.96
CD4P01730 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.05■□□□□ 0.96
CD4P01730 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.05■□□□□ 0.96
CD4P01730 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CD4P01730 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD4P01730 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CD4P01730 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CD4P01730 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.04■□□□□ 0.96
CD4P01730 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CD4P01730 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.04■□□□□ 0.96
CD4P01730 TSSC2-201ENST00000450217 709 ntBASIC21.04■□□□□ 0.96
CD4P01730 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.04■□□□□ 0.96
CD4P01730 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.04■□□□□ 0.96
CD4P01730 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.04■□□□□ 0.96
CD4P01730 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CD4P01730 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD4P01730 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.03■□□□□ 0.96
CD4P01730 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms