Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 KRT8P8-201ENST00000434750 1448 ntBASIC17.79■□□□□ 0.44
TRIM3O75382 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM3O75382 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM3O75382 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TRIM3O75382 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM3O75382 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM3O75382 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM3O75382 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRIM3O75382 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM3O75382 CR392000.1-201ENST00000624770 1228 ntBASIC17.78■□□□□ 0.44
TRIM3O75382 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM3O75382 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.78■□□□□ 0.44
TRIM3O75382 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM3O75382 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM3O75382 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM3O75382 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM3O75382 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM3O75382 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM3O75382 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM3O75382 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM3O75382 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM3O75382 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM3O75382 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM3O75382 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM3O75382 AL355355.2-201ENST00000442321 338 ntBASIC17.77■□□□□ 0.44
TRIM3O75382 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM3O75382 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM3O75382 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.77■□□□□ 0.44
TRIM3O75382 AP003071.4-201ENST00000562276 1284 ntBASIC17.77■□□□□ 0.44
TRIM3O75382 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.77■□□□□ 0.44
TRIM3O75382 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM3O75382 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM3O75382 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM3O75382 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM3O75382 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM3O75382 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM3O75382 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
TRIM3O75382 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM3O75382 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM3O75382 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM3O75382 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM3O75382 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM3O75382 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM3O75382 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM3O75382 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM3O75382 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.77■□□□□ 0.43
TRIM3O75382 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM3O75382 AC020916.1-201ENST00000587762 1774 ntBASIC17.76■□□□□ 0.43
TRIM3O75382 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM3O75382 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM3O75382 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRIM3O75382 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
TRIM3O75382 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRIM3O75382 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
TRIM3O75382 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.76■□□□□ 0.43
TRIM3O75382 NUDT16P1-203ENST00000513809 620 ntBASIC17.76■□□□□ 0.43
TRIM3O75382 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM3O75382 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM3O75382 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM3O75382 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM3O75382 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRIM3O75382 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM3O75382 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM3O75382 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM3O75382 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRIM3O75382 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRIM3O75382 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms