Protein–RNA interactions for Protein: O60423

ATP8B3, Phospholipid-transporting ATPase IK, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8B3O60423 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
ATP8B3O60423 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP8B3O60423 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP8B3O60423 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ATP8B3O60423 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP8B3O60423 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
ATP8B3O60423 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP8B3O60423 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP8B3O60423 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP8B3O60423 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP8B3O60423 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ATP8B3O60423 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
ATP8B3O60423 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP8B3O60423 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP8B3O60423 AC104417.2-201ENST00000562989 1793 ntBASIC20.61■□□□□ 0.89
ATP8B3O60423 AC026271.3-201ENST00000571884 352 ntBASIC20.61■□□□□ 0.89
ATP8B3O60423 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP8B3O60423 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP8B3O60423 AC131212.4-201ENST00000623606 975 ntBASIC20.61■□□□□ 0.89
ATP8B3O60423 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.61■□□□□ 0.89
ATP8B3O60423 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP8B3O60423 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP8B3O60423 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ATP8B3O60423 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ATP8B3O60423 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ATP8B3O60423 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 NUDT16P1-203ENST00000513809 620 ntBASIC20.6■□□□□ 0.89
ATP8B3O60423 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.6■□□□□ 0.89
ATP8B3O60423 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ATP8B3O60423 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP8B3O60423 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
ATP8B3O60423 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ATP8B3O60423 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP8B3O60423 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ATP8B3O60423 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP8B3O60423 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP8B3O60423 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.59■□□□□ 0.89
ATP8B3O60423 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP8B3O60423 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP8B3O60423 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP8B3O60423 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP8B3O60423 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ATP8B3O60423 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP8B3O60423 HLA-A-209ENST00000638375 975 ntBASIC20.59■□□□□ 0.89
ATP8B3O60423 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP8B3O60423 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP8B3O60423 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
ATP8B3O60423 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP8B3O60423 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP8B3O60423 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.59■□□□□ 0.89
ATP8B3O60423 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP8B3O60423 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP8B3O60423 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP8B3O60423 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP8B3O60423 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
ATP8B3O60423 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP8B3O60423 AL031598.1-201ENST00000561511 1773 ntBASIC20.58■□□□□ 0.89
ATP8B3O60423 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP8B3O60423 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP8B3O60423 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.58■□□□□ 0.89
ATP8B3O60423 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP8B3O60423 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 AP003071.4-201ENST00000562276 1284 ntBASIC20.58■□□□□ 0.89
ATP8B3O60423 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP8B3O60423 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP8B3O60423 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
ATP8B3O60423 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP8B3O60423 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP8B3O60423 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms