Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.09■□□□□ 0.65
LDB2O43679 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.09■□□□□ 0.65
LDB2O43679 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LDB2O43679 MIR6786-201ENST00000616843 113 ntBASIC19.09■□□□□ 0.65
LDB2O43679 AL049637.2-201ENST00000641778 930 ntBASIC19.09■□□□□ 0.65
LDB2O43679 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 CROCCP3-202ENST00000420820 1947 ntBASIC19.09■□□□□ 0.65
LDB2O43679 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LDB2O43679 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.09■□□□□ 0.65
LDB2O43679 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 AC004408.2-201ENST00000623613 2777 ntBASIC19.09■□□□□ 0.65
LDB2O43679 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LDB2O43679 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.08■□□□□ 0.65
LDB2O43679 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LDB2O43679 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LDB2O43679 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LDB2O43679 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
LDB2O43679 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LDB2O43679 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LDB2O43679 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.08■□□□□ 0.65
LDB2O43679 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LDB2O43679 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LDB2O43679 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.08■□□□□ 0.64
LDB2O43679 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDB2O43679 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDB2O43679 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDB2O43679 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDB2O43679 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.08■□□□□ 0.64
LDB2O43679 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LDB2O43679 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LDB2O43679 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.08■□□□□ 0.64
LDB2O43679 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
LDB2O43679 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.07■□□□□ 0.64
LDB2O43679 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.07■□□□□ 0.64
LDB2O43679 PRSS44-201ENST00000515154 1146 ntBASIC19.07■□□□□ 0.64
LDB2O43679 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.07■□□□□ 0.64
LDB2O43679 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.07■□□□□ 0.64
LDB2O43679 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.07■□□□□ 0.64
LDB2O43679 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
LDB2O43679 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
LDB2O43679 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LDB2O43679 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LDB2O43679 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LDB2O43679 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.06■□□□□ 0.64
LDB2O43679 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LDB2O43679 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LDB2O43679 FSCN1P1-201ENST00000568912 1481 ntBASIC19.06■□□□□ 0.64
LDB2O43679 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB2O43679 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB2O43679 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB2O43679 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.06■□□□□ 0.64
LDB2O43679 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LDB2O43679 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB2O43679 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.06■□□□□ 0.64
LDB2O43679 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LDB2O43679 AC116562.2-201ENST00000507042 360 ntBASIC19.06■□□□□ 0.64
LDB2O43679 AC008550.1-201ENST00000511500 884 ntBASIC19.06■□□□□ 0.64
LDB2O43679 NUDT16P1-203ENST00000513809 620 ntBASIC19.06■□□□□ 0.64
LDB2O43679 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB2O43679 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB2O43679 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.06■□□□□ 0.64
LDB2O43679 AP001412.1-201ENST00000608405 714 ntBASIC19.06■□□□□ 0.64
LDB2O43679 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB2O43679 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LDB2O43679 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LDB2O43679 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LDB2O43679 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LDB2O43679 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB2O43679 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB2O43679 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LDB2O43679 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.06■□□□□ 0.64
LDB2O43679 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.05■□□□□ 0.64
LDB2O43679 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LDB2O43679 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.05■□□□□ 0.64
LDB2O43679 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms