Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 CD177P1-201ENST00000606252 935 ntBASIC18.21■□□□□ 0.51
RTCAO00442 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.21■□□□□ 0.51
RTCAO00442 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.21■□□□□ 0.51
RTCAO00442 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.21■□□□□ 0.51
RTCAO00442 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RTCAO00442 FP475955.4-201ENST00000623131 1990 ntBASIC18.21■□□□□ 0.5
RTCAO00442 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.2■□□□□ 0.5
RTCAO00442 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RTCAO00442 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RTCAO00442 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.2■□□□□ 0.5
RTCAO00442 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.2■□□□□ 0.5
RTCAO00442 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RTCAO00442 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RTCAO00442 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RTCAO00442 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RTCAO00442 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RTCAO00442 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.2■□□□□ 0.5
RTCAO00442 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.2■□□□□ 0.5
RTCAO00442 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.2■□□□□ 0.5
RTCAO00442 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.2■□□□□ 0.5
RTCAO00442 AC113410.3-201ENST00000623366 203 ntBASIC18.2■□□□□ 0.5
RTCAO00442 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.2■□□□□ 0.5
RTCAO00442 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 AL135905.2-201ENST00000584934 1404 ntBASIC18.2■□□□□ 0.5
RTCAO00442 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 RCC2P6-201ENST00000526625 1557 ntBASIC18.2■□□□□ 0.5
RTCAO00442 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.2■□□□□ 0.5
RTCAO00442 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTCAO00442 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 BX323043.1-201ENST00000641006 1765 ntBASIC18.19■□□□□ 0.5
RTCAO00442 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RTCAO00442 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.19■□□□□ 0.5
RTCAO00442 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.19■□□□□ 0.5
RTCAO00442 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.19■□□□□ 0.5
RTCAO00442 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.19■□□□□ 0.5
RTCAO00442 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.19■□□□□ 0.5
RTCAO00442 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.19■□□□□ 0.5
RTCAO00442 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 AC008040.2-201ENST00000461049 708 ntBASIC18.19■□□□□ 0.5
RTCAO00442 AC091390.4-202ENST00000476426 537 ntBASIC18.19■□□□□ 0.5
RTCAO00442 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RTCAO00442 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RTCAO00442 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.19■□□□□ 0.5
RTCAO00442 AC233702.5-201ENST00000584107 538 ntBASIC18.19■□□□□ 0.5
RTCAO00442 AL031985.4-201ENST00000642138 673 ntBASIC18.19■□□□□ 0.5
RTCAO00442 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RTCAO00442 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTCAO00442 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.19■□□□□ 0.5
RTCAO00442 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.18■□□□□ 0.5
RTCAO00442 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RTCAO00442 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RTCAO00442 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.18■□□□□ 0.5
RTCAO00442 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.18■□□□□ 0.5
RTCAO00442 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RTCAO00442 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.18■□□□□ 0.5
RTCAO00442 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 AC011506.1-201ENST00000474329 610 ntBASIC18.18■□□□□ 0.5
RTCAO00442 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 AC008550.1-201ENST00000511500 884 ntBASIC18.18■□□□□ 0.5
RTCAO00442 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.18■□□□□ 0.5
RTCAO00442 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.18■□□□□ 0.5
RTCAO00442 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.18■□□□□ 0.5
RTCAO00442 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RTCAO00442 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.18■□□□□ 0.5
RTCAO00442 AL049637.2-201ENST00000641778 930 ntBASIC18.18■□□□□ 0.5
RTCAO00442 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.18■□□□□ 0.5
RTCAO00442 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 TNXA-203ENST00000507684 2038 ntBASIC18.18■□□□□ 0.5
RTCAO00442 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.18■□□□□ 0.5
RTCAO00442 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms