Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1AO00322 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
UPK1AO00322 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.11■□□□□ 0.49
UPK1AO00322 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK1AO00322 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
UPK1AO00322 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
UPK1AO00322 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK1AO00322 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
UPK1AO00322 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK1AO00322 AC239809.2-201ENST00000415381 517 ntBASIC18.1■□□□□ 0.49
UPK1AO00322 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK1AO00322 AC128676.1-201ENST00000454392 318 ntBASIC18.1■□□□□ 0.49
UPK1AO00322 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.1■□□□□ 0.49
UPK1AO00322 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK1AO00322 AC004264.1-201ENST00000608354 794 ntBASIC18.1■□□□□ 0.49
UPK1AO00322 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
UPK1AO00322 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.1■□□□□ 0.49
UPK1AO00322 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.1■□□□□ 0.49
UPK1AO00322 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK1AO00322 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
UPK1AO00322 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1AO00322 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK1AO00322 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UPK1AO00322 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.09■□□□□ 0.49
UPK1AO00322 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
UPK1AO00322 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.09■□□□□ 0.49
UPK1AO00322 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 KRASP1-201ENST00000407852 552 ntBASIC18.09■□□□□ 0.49
UPK1AO00322 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.09■□□□□ 0.49
UPK1AO00322 AC124016.1-201ENST00000609552 612 ntBASIC18.09■□□□□ 0.49
UPK1AO00322 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 FP475955.4-201ENST00000623131 1990 ntBASIC18.09■□□□□ 0.49
UPK1AO00322 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.09■□□□□ 0.49
UPK1AO00322 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
UPK1AO00322 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 PCDHB18P-201ENST00000524813 2368 ntBASIC18.09■□□□□ 0.49
UPK1AO00322 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
UPK1AO00322 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.09■□□□□ 0.49
UPK1AO00322 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1AO00322 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1AO00322 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1AO00322 AC120498.9-201ENST00000339021 3867 ntBASIC18.08■□□□□ 0.49
UPK1AO00322 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
UPK1AO00322 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1AO00322 SDHAP1-207ENST00000440850 2000 ntBASIC18.08■□□□□ 0.49
UPK1AO00322 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.08■□□□□ 0.49
UPK1AO00322 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.08■□□□□ 0.49
UPK1AO00322 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.08■□□□□ 0.49
UPK1AO00322 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.08■□□□□ 0.49
UPK1AO00322 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
UPK1AO00322 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.08■□□□□ 0.49
UPK1AO00322 AL354751.1-201ENST00000412768 1863 ntBASIC18.08■□□□□ 0.49
UPK1AO00322 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
UPK1AO00322 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.08■□□□□ 0.48
UPK1AO00322 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UPK1AO00322 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.08■□□□□ 0.48
UPK1AO00322 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.08■□□□□ 0.48
UPK1AO00322 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.08■□□□□ 0.48
UPK1AO00322 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.08■□□□□ 0.48
UPK1AO00322 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1AO00322 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UPK1AO00322 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.07■□□□□ 0.48
UPK1AO00322 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms