Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 NTF6B-201ENST00000591913 560 ntBASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PCDHAC2-203ENST00000615316 3011 ntBASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 YBX1P2-201ENST00000489612 999 ntBASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 KRT8P45-201ENST00000414328 1447 ntBASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC092647.4-201ENST00000457211 535 ntBASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC063952.2-201ENST00000498792 1227 ntBASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 WWOX-216ENST00000569818 525 ntBASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC087388.1-201ENST00000571370 1112 ntBASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC140113.3-201ENST00000605663 199 ntBASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.11■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.1■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms