Protein–RNA interactions for Protein: C9JL84

HHLA1, HERV-H LTR-associating protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA1C9JL84 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HHLA1C9JL84 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.92■□□□□ 0.78
HHLA1C9JL84 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HHLA1C9JL84 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.92■□□□□ 0.78
HHLA1C9JL84 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
HHLA1C9JL84 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HHLA1C9JL84 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.92■□□□□ 0.78
HHLA1C9JL84 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HHLA1C9JL84 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.92■□□□□ 0.78
HHLA1C9JL84 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.92■□□□□ 0.78
HHLA1C9JL84 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HHLA1C9JL84 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.92■□□□□ 0.78
HHLA1C9JL84 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HHLA1C9JL84 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.91■□□□□ 0.78
HHLA1C9JL84 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.91■□□□□ 0.78
HHLA1C9JL84 AL137013.1-201ENST00000432946 1228 ntBASIC19.91■□□□□ 0.78
HHLA1C9JL84 KRT18P57-201ENST00000443599 1254 ntBASIC19.91■□□□□ 0.78
HHLA1C9JL84 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.91■□□□□ 0.78
HHLA1C9JL84 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.91■□□□□ 0.78
HHLA1C9JL84 AL138966.2-201ENST00000621997 464 ntBASIC19.91■□□□□ 0.78
HHLA1C9JL84 AC092865.7-201ENST00000641832 219 ntBASIC19.91■□□□□ 0.78
HHLA1C9JL84 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.91■□□□□ 0.78
HHLA1C9JL84 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.91■□□□□ 0.78
HHLA1C9JL84 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HHLA1C9JL84 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.91■□□□□ 0.78
HHLA1C9JL84 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HHLA1C9JL84 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HHLA1C9JL84 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HHLA1C9JL84 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HHLA1C9JL84 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HHLA1C9JL84 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HHLA1C9JL84 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HHLA1C9JL84 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HHLA1C9JL84 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.9■□□□□ 0.78
HHLA1C9JL84 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.9■□□□□ 0.78
HHLA1C9JL84 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HHLA1C9JL84 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HHLA1C9JL84 AL161938.1-201ENST00000569833 2180 ntBASIC19.9■□□□□ 0.78
HHLA1C9JL84 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
HHLA1C9JL84 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HHLA1C9JL84 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HHLA1C9JL84 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.89■□□□□ 0.77
HHLA1C9JL84 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HHLA1C9JL84 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
HHLA1C9JL84 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 KRT8P45-201ENST00000414328 1447 ntBASIC19.89■□□□□ 0.77
HHLA1C9JL84 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.89■□□□□ 0.77
HHLA1C9JL84 GPAT2P1-201ENST00000444924 1672 ntBASIC19.89■□□□□ 0.77
HHLA1C9JL84 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
HHLA1C9JL84 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.89■□□□□ 0.77
HHLA1C9JL84 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.89■□□□□ 0.77
HHLA1C9JL84 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.89■□□□□ 0.77
HHLA1C9JL84 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HHLA1C9JL84 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HHLA1C9JL84 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HHLA1C9JL84 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.88■□□□□ 0.77
HHLA1C9JL84 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HHLA1C9JL84 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.88■□□□□ 0.77
HHLA1C9JL84 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HHLA1C9JL84 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HHLA1C9JL84 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.88■□□□□ 0.77
HHLA1C9JL84 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms