Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3BA6NDS4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 IER3-202ENST00000376377 1350 ntBASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 KRT18P38-201ENST00000449496 1282 ntBASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 GCSHP2-201ENST00000560971 527 ntBASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 MIR4674-201ENST00000582457 87 ntBASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TBC1D3BA6NDS4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TBC1D3BA6NDS4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 CR769767.2-201ENST00000622735 460 ntBASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.35■□□□□ 0.69
TBC1D3BA6NDS4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 AC112907.2-201ENST00000448639 330 ntBASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TBC1D3BA6NDS4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms