Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 HCG11-201ENST00000411553 5696 ntBASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CR392000.1-201ENST00000624770 1228 ntBASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC133561.5-201ENST00000635547 218 ntBASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV4S1A1TA0A5B7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 TSPY15P-201ENST00000457163 923 ntBASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TCRBV4S1A1TA0A5B7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TCRBV4S1A1TA0A5B7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TCRBV4S1A1TA0A5B7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.33■□□□□ 0.05
TCRBV4S1A1TA0A5B7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TCRBV4S1A1TA0A5B7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.33■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AL353708.3-201ENST00000610272 989 ntBASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC018553.1-201ENST00000616682 1458 ntBASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC116351.2-201ENST00000606540 1585 ntBASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms