Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 AL589743.5-201ENST00000616611 1050 ntBASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRDV1A0A1B0GX56 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 AC126763.1-201ENST00000552015 2118 ntBASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRDV1A0A1B0GX56 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 AL355472.2-201ENST00000422958 438 ntBASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRDV1A0A1B0GX56 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRDV1A0A1B0GX56 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRDV1A0A1B0GX56 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.77■□□□□ 0.27
TRDV1A0A1B0GX56 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
TRDV1A0A1B0GX56 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRDV1A0A1B0GX56 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRDV1A0A1B0GX56 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRDV1A0A1B0GX56 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRDV1A0A1B0GX56 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRDV1A0A1B0GX56 PRORSD1P-202ENST00000563365 2154 ntBASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms