Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 MIR4758-201ENST00000577688 71 ntBASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC124283.5-201ENST00000624661 1809 ntBASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF103-CHMP3A0A140T963 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF103-CHMP3A0A140T963 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC092368.3-202ENST00000574180 1591 ntBASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF103-CHMP3A0A140T963 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms