Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 FZD10-202ENST00000539839 3282 ntBASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 AC069152.1-201ENST00000438030 544 ntBASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV30A0A087WSZ9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 AC083880.1-201ENST00000608266 535 ntBASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 FP475955.4-201ENST00000623131 1990 ntBASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV30A0A087WSZ9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms