Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL049539.1-201ENST00000611964 459 ntBASIC5.41□□□□□ -1.54
VARSP26640 CU639417.4-201ENST00000623928 207 ntBASIC5.41□□□□□ -1.54
VARSP26640 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.41□□□□□ -1.54
VARSP26640 AC073869.8-201ENST00000641806 335 ntBASIC5.41□□□□□ -1.54
VARSP26640 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARSP26640 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARSP26640 AC023421.1-201ENST00000590535 1785 ntBASIC5.41□□□□□ -1.54
VARSP26640 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.41□□□□□ -1.54
VARSP26640 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VARSP26640 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARSP26640 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.41□□□□□ -1.54
VARSP26640 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.41□□□□□ -1.54
VARSP26640 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARSP26640 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VARSP26640 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
VARSP26640 ADAM5-202ENST00000399789 1942 ntBASIC5.4□□□□□ -1.54
VARSP26640 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VARSP26640 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VARSP26640 MAPK10-349ENST00000641767 3661 ntBASIC5.4□□□□□ -1.54
VARSP26640 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VARSP26640 RNA5SP205-201ENST00000364653 136 ntBASIC5.4□□□□□ -1.54
VARSP26640 RNA5SP131-201ENST00000365452 119 ntBASIC5.4□□□□□ -1.54
VARSP26640 RNU6-318P-201ENST00000384283 103 ntBASIC5.4□□□□□ -1.54
VARSP26640 AL133270.1-201ENST00000402635 279 ntBASIC5.4□□□□□ -1.54
VARSP26640 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.4□□□□□ -1.54
VARSP26640 AL158156.1-201ENST00000422509 473 ntBASIC5.4□□□□□ -1.54
VARSP26640 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.4□□□□□ -1.54
VARSP26640 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.4□□□□□ -1.54
VARSP26640 SNORD2.1-201ENST00000458762 69 ntBASIC5.4□□□□□ -1.54
VARSP26640 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.4□□□□□ -1.54
VARSP26640 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.4□□□□□ -1.54
VARSP26640 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.4□□□□□ -1.54
VARSP26640 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VARSP26640 MIR4311-201ENST00000580794 100 ntBASIC5.4□□□□□ -1.54
VARSP26640 AC107294.1-201ENST00000609524 467 ntBASIC5.4□□□□□ -1.54
VARSP26640 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.4□□□□□ -1.54
VARSP26640 AC010632.3-201ENST00000611377 369 ntBASIC5.4□□□□□ -1.54
VARSP26640 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.4□□□□□ -1.55
VARSP26640 AL109809.4-201ENST00000603520 2185 ntBASIC5.4□□□□□ -1.55
VARSP26640 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VARSP26640 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VARSP26640 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VARSP26640 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
VARSP26640 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VARSP26640 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VARSP26640 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VARSP26640 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.39□□□□□ -1.55
VARSP26640 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
VARSP26640 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VARSP26640 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
VARSP26640 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.39□□□□□ -1.55
VARSP26640 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.39□□□□□ -1.55
VARSP26640 MIR410-201ENST00000362222 80 ntBASIC5.39□□□□□ -1.55
VARSP26640 RNU6-1249P-201ENST00000363237 111 ntBASIC5.39□□□□□ -1.55
VARSP26640 Y_RNA.215-201ENST00000364204 112 ntBASIC5.39□□□□□ -1.55
VARSP26640 RNU4-9P-201ENST00000364951 139 ntBASIC5.39□□□□□ -1.55
VARSP26640 RNU6-843P-201ENST00000384454 104 ntBASIC5.39□□□□□ -1.55
VARSP26640 DUTP5-201ENST00000406790 469 ntBASIC5.39□□□□□ -1.55
VARSP26640 RNA5SP487-201ENST00000410186 122 ntBASIC5.39□□□□□ -1.55
VARSP26640 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.39□□□□□ -1.55
VARSP26640 AC024067.1-201ENST00000426199 223 ntBASIC5.39□□□□□ -1.55
VARSP26640 AC008065.1-201ENST00000428525 348 ntBASIC5.39□□□□□ -1.55
VARSP26640 RPL7L1P9-201ENST00000431298 745 ntBASIC5.39□□□□□ -1.55
VARSP26640 NDUFB4P8-201ENST00000435351 367 ntBASIC5.39□□□□□ -1.55
VARSP26640 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.39□□□□□ -1.55
VARSP26640 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.39□□□□□ -1.55
VARSP26640 ENPP7P11-201ENST00000505915 627 ntBASIC5.39□□□□□ -1.55
VARSP26640 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.39□□□□□ -1.55
VARSP26640 AK6P2-201ENST00000549020 471 ntBASIC5.39□□□□□ -1.55
VARSP26640 AC005476.1-201ENST00000554427 397 ntBASIC5.39□□□□□ -1.55
VARSP26640 AC008749.1-201ENST00000597650 306 ntBASIC5.39□□□□□ -1.55
VARSP26640 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.39□□□□□ -1.55
VARSP26640 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.39□□□□□ -1.55
VARSP26640 AC005046.1-201ENST00000608515 625 ntBASIC5.39□□□□□ -1.55
VARSP26640 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.39□□□□□ -1.55
VARSP26640 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.39□□□□□ -1.55
VARSP26640 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
VARSP26640 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
VARSP26640 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VARSP26640 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VARSP26640 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.39□□□□□ -1.55
VARSP26640 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.38□□□□□ -1.55
VARSP26640 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VARSP26640 AP001642.1-201ENST00000624727 2117 ntBASIC5.38□□□□□ -1.55
VARSP26640 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VARSP26640 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.38□□□□□ -1.55
VARSP26640 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.38□□□□□ -1.55
VARSP26640 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VARSP26640 SNORA58B-201ENST00000364259 136 ntBASIC5.38□□□□□ -1.55
VARSP26640 SNORD14B-201ENST00000364533 90 ntBASIC5.38□□□□□ -1.55
VARSP26640 Y_RNA.261-201ENST00000364631 102 ntBASIC5.38□□□□□ -1.55
VARSP26640 Y_RNA.273-201ENST00000364703 102 ntBASIC5.38□□□□□ -1.55
VARSP26640 Y_RNA.446-201ENST00000384178 104 ntBASIC5.38□□□□□ -1.55
VARSP26640 RPS4XP3-201ENST00000398541 413 ntBASIC5.38□□□□□ -1.55
VARSP26640 AL009179.1-201ENST00000406085 265 ntBASIC5.38□□□□□ -1.55
VARSP26640 OOSP1P1-201ENST00000423265 274 ntBASIC5.38□□□□□ -1.55
VARSP26640 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.38□□□□□ -1.55
VARSP26640 RPS27AP12-201ENST00000429552 465 ntBASIC5.38□□□□□ -1.55
VARSP26640 RPS15AP7-201ENST00000439294 405 ntBASIC5.38□□□□□ -1.55
VARSP26640 EEF1B2P6-201ENST00000445713 673 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms