Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR548M-201ENST00000408260 86 ntBASIC4.93□□□□□ -1.62
SOX1O00570 RPS15AP6-201ENST00000420703 385 ntBASIC4.93□□□□□ -1.62
SOX1O00570 RPL21P91-201ENST00000429231 479 ntBASIC4.93□□□□□ -1.62
SOX1O00570 HMGB1P27-201ENST00000431429 603 ntBASIC4.93□□□□□ -1.62
SOX1O00570 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX1O00570 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX1O00570 GEMIN8P3-201ENST00000445417 720 ntBASIC4.93□□□□□ -1.62
SOX1O00570 MTND4LP30-201ENST00000454092 297 ntBASIC4.93□□□□□ -1.62
SOX1O00570 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX1O00570 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX1O00570 RN7SL558P-201ENST00000497468 299 ntBASIC4.93□□□□□ -1.62
SOX1O00570 HMGB3P17-201ENST00000504195 649 ntBASIC4.93□□□□□ -1.62
SOX1O00570 CBX3P8-201ENST00000532412 525 ntBASIC4.93□□□□□ -1.62
SOX1O00570 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX1O00570 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX1O00570 NDUFB4P11-201ENST00000560510 395 ntBASIC4.93□□□□□ -1.62
SOX1O00570 RAC1P9-201ENST00000604990 392 ntBASIC4.93□□□□□ -1.62
SOX1O00570 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX1O00570 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
SOX1O00570 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX1O00570 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX1O00570 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX1O00570 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX1O00570 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SOX1O00570 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX1O00570 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX1O00570 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SOX1O00570 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX1O00570 AC027228.2-201ENST00000567141 2154 ntBASIC4.92□□□□□ -1.62
SOX1O00570 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SOX1O00570 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX1O00570 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX1O00570 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX1O00570 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX1O00570 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX1O00570 RNA5SP130-201ENST00000364431 114 ntBASIC4.92□□□□□ -1.62
SOX1O00570 SNORD73A-201ENST00000386062 65 ntBASIC4.92□□□□□ -1.62
SOX1O00570 RNU2-43P-201ENST00000410306 190 ntBASIC4.92□□□□□ -1.62
SOX1O00570 RAB9AP3-201ENST00000412737 573 ntBASIC4.92□□□□□ -1.62
SOX1O00570 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX1O00570 AC139712.2-201ENST00000424302 339 ntBASIC4.92□□□□□ -1.62
SOX1O00570 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX1O00570 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX1O00570 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX1O00570 RAB9AP1-201ENST00000449393 573 ntBASIC4.92□□□□□ -1.62
SOX1O00570 OR2AQ1P-201ENST00000451972 200 ntBASIC4.92□□□□□ -1.62
SOX1O00570 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SOX1O00570 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.92□□□□□ -1.62
SOX1O00570 MTND3P25-201ENST00000509243 135 ntBASIC4.92□□□□□ -1.62
SOX1O00570 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX1O00570 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX1O00570 RRN3P3-201ENST00000549207 578 ntBASIC4.92□□□□□ -1.62
SOX1O00570 HSPE1P5-201ENST00000561489 272 ntBASIC4.92□□□□□ -1.62
SOX1O00570 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.92□□□□□ -1.62
SOX1O00570 AC012669.1-201ENST00000603209 283 ntBASIC4.92□□□□□ -1.62
SOX1O00570 AC019176.2-201ENST00000611579 315 ntBASIC4.92□□□□□ -1.62
SOX1O00570 AL159153.1-201ENST00000619688 317 ntBASIC4.92□□□□□ -1.62
SOX1O00570 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.92□□□□□ -1.62
SOX1O00570 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SOX1O00570 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SOX1O00570 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX1O00570 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX1O00570 THAP12P5-201ENST00000405864 2275 ntBASIC4.92□□□□□ -1.62
SOX1O00570 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX1O00570 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SOX1O00570 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX1O00570 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX1O00570 Y_RNA.26-201ENST00000362539 101 ntBASIC4.91□□□□□ -1.62
SOX1O00570 RNY3P11-201ENST00000364153 102 ntBASIC4.91□□□□□ -1.62
SOX1O00570 RNU6-200P-201ENST00000364743 107 ntBASIC4.91□□□□□ -1.62
SOX1O00570 RNU6-806P-201ENST00000365147 105 ntBASIC4.91□□□□□ -1.62
SOX1O00570 RNU6-1279P-201ENST00000383917 103 ntBASIC4.91□□□□□ -1.62
SOX1O00570 SNORA51.11-201ENST00000384442 131 ntBASIC4.91□□□□□ -1.62
SOX1O00570 RNU6-33P-201ENST00000384793 107 ntBASIC4.91□□□□□ -1.62
SOX1O00570 RNU4-78P-201ENST00000410940 126 ntBASIC4.91□□□□□ -1.62
SOX1O00570 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX1O00570 UBE2D3P2-201ENST00000424409 445 ntBASIC4.91□□□□□ -1.62
SOX1O00570 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.91□□□□□ -1.62
SOX1O00570 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX1O00570 PRDX3P3-201ENST00000447765 522 ntBASIC4.91□□□□□ -1.62
SOX1O00570 RPL37P6-202ENST00000464216 403 ntBASIC4.91□□□□□ -1.62
SOX1O00570 FO393415.2-201ENST00000480085 343 ntBASIC4.91□□□□□ -1.62
SOX1O00570 GZMAP1-201ENST00000503054 631 ntBASIC4.91□□□□□ -1.62
SOX1O00570 Y_RNA.673-201ENST00000516306 88 ntBASIC4.91□□□□□ -1.62
SOX1O00570 RNU6-406P-201ENST00000516470 107 ntBASIC4.91□□□□□ -1.62
SOX1O00570 RNU6-914P-201ENST00000516749 109 ntBASIC4.91□□□□□ -1.62
SOX1O00570 IGKV2D-23-201ENST00000518179 286 ntBASIC4.91□□□□□ -1.62
SOX1O00570 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.91□□□□□ -1.62
SOX1O00570 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.91□□□□□ -1.62
SOX1O00570 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX1O00570 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX1O00570 AL137100.2-201ENST00000555786 315 ntBASIC4.91□□□□□ -1.62
SOX1O00570 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX1O00570 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX1O00570 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SOX1O00570 RLIMP1-201ENST00000339626 1680 ntBASIC4.91□□□□□ -1.62
SOX1O00570 AC139769.1-204ENST00000472297 1931 ntBASIC4.91□□□□□ -1.62
SOX1O00570 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SOX1O00570 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.91□□□□□ -1.62
SOX1O00570 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms