RNA–Protein interactions for RNA: ENST00000516470.1

RNU6-406P-201, Transcript of RNA, U6 small nuclear 406, pseudogene, humanhuman

BASIC

Gene RNU6-406P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-406P-201ENST00000516470 AEBP2Q6ZN18 517 aaPredicted RBP23.21■■□□□ 1.31
RNU6-406P-201ENST00000516470 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
RNU6-406P-201ENST00000516470 SENP3Q9H4L4 574 aaPredicted RBP19.84■□□□□ 0.77
RNU6-406P-201ENST00000516470 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
RNU6-406P-201ENST00000516470 POTEDQ86YR6 584 aa19.08■□□□□ 0.64
RNU6-406P-201ENST00000516470 FOXD1Q16676 465 aa18.7■□□□□ 0.58
RNU6-406P-201ENST00000516470 MSH5O43196 834 aa17.76■□□□□ 0.43
RNU6-406P-201ENST00000516470 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
RNU6-406P-201ENST00000516470 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
RNU6-406P-201ENST00000516470 ADRA2BP18089 450 aa16.69■□□□□ 0.26
RNU6-406P-201ENST00000516470 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
RNU6-406P-201ENST00000516470 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
RNU6-406P-201ENST00000516470 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
RNU6-406P-201ENST00000516470 DMRT2Q9Y5R5 561 aa15.59■□□□□ 0.09
RNU6-406P-201ENST00000516470 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
RNU6-406P-201ENST00000516470 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
RNU6-406P-201ENST00000516470 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
RNU6-406P-201ENST00000516470 C1QBPQ07021 282 aaKnown RBP14.78□□□□□ -0.04
RNU6-406P-201ENST00000516470 POTEHQ6S545 545 aa14.75□□□□□ -0.05
RNU6-406P-201ENST00000516470 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
RNU6-406P-201ENST00000516470 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
RNU6-406P-201ENST00000516470 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
RNU6-406P-201ENST00000516470 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
RNU6-406P-201ENST00000516470 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
RNU6-406P-201ENST00000516470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
RNU6-406P-201ENST00000516470 DSG3P32926 999 aa13.85□□□□□ -0.19
RNU6-406P-201ENST00000516470 CAPN15O75808 1086 aa13.76□□□□□ -0.21
RNU6-406P-201ENST00000516470 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
RNU6-406P-201ENST00000516470 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
RNU6-406P-201ENST00000516470 ABCB7O75027 752 aa13.42□□□□□ -0.26
RNU6-406P-201ENST00000516470 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
RNU6-406P-201ENST00000516470 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
RNU6-406P-201ENST00000516470 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
RNU6-406P-201ENST00000516470 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
RNU6-406P-201ENST00000516470 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
RNU6-406P-201ENST00000516470 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
RNU6-406P-201ENST00000516470 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
RNU6-406P-201ENST00000516470 APLP2Q06481 763 aa12.98□□□□□ -0.33
RNU6-406P-201ENST00000516470 HAX1O00165 279 aa12.89□□□□□ -0.35
RNU6-406P-201ENST00000516470 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
RNU6-406P-201ENST00000516470 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
RNU6-406P-201ENST00000516470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
RNU6-406P-201ENST00000516470 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
RNU6-406P-201ENST00000516470 POLA2Q14181 598 aa12.72□□□□□ -0.37
RNU6-406P-201ENST00000516470 EVX2Q03828 476 aa12.7□□□□□ -0.38
RNU6-406P-201ENST00000516470 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
RNU6-406P-201ENST00000516470 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
RNU6-406P-201ENST00000516470 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
RNU6-406P-201ENST00000516470 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
RNU6-406P-201ENST00000516470 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
RNU6-406P-201ENST00000516470 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
RNU6-406P-201ENST00000516470 LHX8Q68G74 356 aa12.53□□□□□ -0.4
RNU6-406P-201ENST00000516470 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
RNU6-406P-201ENST00000516470 GABBR2O75899 941 aa12.3□□□□□ -0.44
RNU6-406P-201ENST00000516470 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
RNU6-406P-201ENST00000516470 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
RNU6-406P-201ENST00000516470 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
RNU6-406P-201ENST00000516470 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
RNU6-406P-201ENST00000516470 KCNA4P22459 653 aa12.17□□□□□ -0.46
RNU6-406P-201ENST00000516470 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
RNU6-406P-201ENST00000516470 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
RNU6-406P-201ENST00000516470 CLEC11AQ9Y240 323 aa12.03□□□□□ -0.48
RNU6-406P-201ENST00000516470 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
RNU6-406P-201ENST00000516470 POTEMA6NI47 508 aa11.88□□□□□ -0.51
RNU6-406P-201ENST00000516470 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
RNU6-406P-201ENST00000516470 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
RNU6-406P-201ENST00000516470 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
RNU6-406P-201ENST00000516470 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
RNU6-406P-201ENST00000516470 POTEGQ6S5H5 508 aa11.82□□□□□ -0.52
RNU6-406P-201ENST00000516470 OTUD5Q96G74 571 aa11.77□□□□□ -0.53
RNU6-406P-201ENST00000516470 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
RNU6-406P-201ENST00000516470 CD44P16070 742 aaKnown RBP11.75□□□□□ -0.53
RNU6-406P-201ENST00000516470 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
RNU6-406P-201ENST00000516470 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
RNU6-406P-201ENST00000516470 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
RNU6-406P-201ENST00000516470 FBLN2P98095 1184 aa11.6□□□□□ -0.55
RNU6-406P-201ENST00000516470 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
RNU6-406P-201ENST00000516470 PCDH10Q9P2E7 1040 aa11.57□□□□□ -0.56
RNU6-406P-201ENST00000516470 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
RNU6-406P-201ENST00000516470 CLCN6P51797 869 aa11.56□□□□□ -0.56
RNU6-406P-201ENST00000516470 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
RNU6-406P-201ENST00000516470 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
RNU6-406P-201ENST00000516470 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
RNU6-406P-201ENST00000516470 ZNF579Q8NAF0 562 aaKnown RBP11.45□□□□□ -0.58
RNU6-406P-201ENST00000516470 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
RNU6-406P-201ENST00000516470 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
RNU6-406P-201ENST00000516470 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
RNU6-406P-201ENST00000516470 FAM163AQ96GL9 167 aaPredicted RBP11.37□□□□□ -0.59
RNU6-406P-201ENST00000516470 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
RNU6-406P-201ENST00000516470 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
RNU6-406P-201ENST00000516470 SLC4A1APQ9BWU0 796 aaKnown RBP11.26□□□□□ -0.61
RNU6-406P-201ENST00000516470 PHF12Q96QT6 1004 aa11.24□□□□□ -0.61
RNU6-406P-201ENST00000516470 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
RNU6-406P-201ENST00000516470 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
RNU6-406P-201ENST00000516470 ZBTB22O15209 634 aa11.19□□□□□ -0.62
RNU6-406P-201ENST00000516470 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
RNU6-406P-201ENST00000516470 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
RNU6-406P-201ENST00000516470 C7P10643 843 aa11.11□□□□□ -0.63
RNU6-406P-201ENST00000516470 SLC39A7Q92504 469 aa11.11□□□□□ -0.63
RNU6-406P-201ENST00000516470 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms