Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNED1Q8TER0 RNU6-619P-201ENST00000365146 108 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 Y_RNA.453-201ENST00000384223 109 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 RPL21P3-201ENST00000395517 478 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 FCF1P10-201ENST00000407590 479 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 MIR1277-201ENST00000408536 78 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC138393.2-201ENST00000414742 246 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 MTATP6P27-201ENST00000416987 621 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC007742.1-201ENST00000425789 329 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC000111.3-201ENST00000433478 193 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 MTND4LP10-201ENST00000435146 291 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 ELOCP26-201ENST00000436067 329 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 HMGN3P1-201ENST00000453847 193 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC146507.2-201ENST00000460608 476 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 RPL23AP62-201ENST00000463396 453 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 SNRPGP3-201ENST00000469405 227 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AP002884.2-201ENST00000471647 395 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC087879.1-201ENST00000474343 374 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC011352.3-201ENST00000505162 593 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 RN7SKP43-201ENST00000516173 320 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 RNY4P37-201ENST00000516225 96 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AF279873.1-201ENST00000523393 313 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 OR4A45P-201ENST00000529954 901 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNED1Q8TER0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 AP001004.1-201ENST00000582468 324 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 RNU6-88P-201ENST00000606801 100 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC103710.3-201ENST00000608157 948 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC006338.1-201ENST00000618453 749 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 AC124864.2-201ENST00000624736 186 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 CDR1-202ENST00000625883 1485 ntBASIC3.32□□□□□ -1.88
SNED1Q8TER0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 AP001148.1-201ENST00000624124 2359 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNED1Q8TER0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 Y_RNA.9-201ENST00000362354 101 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 RNU6-492P-201ENST00000363035 104 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNED1Q8TER0 AL590002.1-201ENST00000406554 418 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 OR51A5P-201ENST00000415429 942 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 USP9YP13-201ENST00000417797 480 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AIMP1P1-201ENST00000418670 937 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 OFD1P18Y-201ENST00000420889 959 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 PSPHP1-201ENST00000450062 261 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 NF1P3-201ENST00000457709 450 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 snoU13.15-201ENST00000459407 104 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 LARP1BP2-201ENST00000486594 519 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 ANXA2P1-201ENST00000505539 926 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 TXNP6-201ENST00000510190 310 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AF131216.2-201ENST00000512316 564 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC046134.1-201ENST00000514454 666 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 RNU6-507P-201ENST00000516045 100 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 SNORA31.21-201ENST00000517180 77 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC138915.2-201ENST00000569776 97 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC137800.2-201ENST00000574375 120 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC005730.3-201ENST00000583067 366 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC008687.2-201ENST00000597865 520 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC090578.1-201ENST00000604955 591 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC104260.1-201ENST00000616660 539 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 MIR3688-2-201ENST00000636963 87 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.31□□□□□ -1.88
SNED1Q8TER0 MKKS-204ENST00000639674 192 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 MTND4P16-201ENST00000466108 1367 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNED1Q8TER0 AP006437.1-201ENST00000641440 3685 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNED1Q8TER0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNED1Q8TER0 AC092593.1-201ENST00000515413 1815 ntBASIC3.31□□□□□ -1.88
SNED1Q8TER0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 MTND4P12-201ENST00000498999 1377 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 RNU6-433P-201ENST00000363216 104 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 RNU6-335P-201ENST00000364563 113 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 RNU5E-5P-201ENST00000365379 116 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNED1Q8TER0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms