RNA–Protein interactions for RNA: ENST00000604955.1

AC090578.1-201, humanhuman

BASIC

Gene AC090578.1, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090578.1-201ENST00000604955 AEBP2Q6ZN18 517 aaPredicted RBP24.97■■□□□ 1.59
AC090578.1-201ENST00000604955 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
AC090578.1-201ENST00000604955 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
AC090578.1-201ENST00000604955 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
AC090578.1-201ENST00000604955 FOXD1Q16676 465 aa19.84■□□□□ 0.77
AC090578.1-201ENST00000604955 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
AC090578.1-201ENST00000604955 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
AC090578.1-201ENST00000604955 MSH5O43196 834 aa18.56■□□□□ 0.56
AC090578.1-201ENST00000604955 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
AC090578.1-201ENST00000604955 PIAS4Q8N2W9 510 aaPredicted RBP18.49■□□□□ 0.55
AC090578.1-201ENST00000604955 ADRA2BP18089 450 aa18.43■□□□□ 0.54
AC090578.1-201ENST00000604955 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
AC090578.1-201ENST00000604955 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
AC090578.1-201ENST00000604955 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
AC090578.1-201ENST00000604955 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
AC090578.1-201ENST00000604955 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
AC090578.1-201ENST00000604955 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
AC090578.1-201ENST00000604955 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
AC090578.1-201ENST00000604955 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
AC090578.1-201ENST00000604955 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
AC090578.1-201ENST00000604955 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
AC090578.1-201ENST00000604955 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
AC090578.1-201ENST00000604955 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
AC090578.1-201ENST00000604955 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
AC090578.1-201ENST00000604955 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
AC090578.1-201ENST00000604955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.05
AC090578.1-201ENST00000604955 KCNA4P22459 653 aa15.38■□□□□ 0.05
AC090578.1-201ENST00000604955 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
AC090578.1-201ENST00000604955 SLC4A2P04920 1241 aa15.03■□□□□ -0
AC090578.1-201ENST00000604955 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
AC090578.1-201ENST00000604955 DSG3P32926 999 aa14.83□□□□□ -0.04
AC090578.1-201ENST00000604955 CAPN15O75808 1086 aa14.82□□□□□ -0.04
AC090578.1-201ENST00000604955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
AC090578.1-201ENST00000604955 APLP2Q06481 763 aa14.68□□□□□ -0.06
AC090578.1-201ENST00000604955 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
AC090578.1-201ENST00000604955 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
AC090578.1-201ENST00000604955 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
AC090578.1-201ENST00000604955 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
AC090578.1-201ENST00000604955 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
AC090578.1-201ENST00000604955 ABCB7O75027 752 aa14.49□□□□□ -0.09
AC090578.1-201ENST00000604955 POTEHQ6S545 545 aa14.49□□□□□ -0.09
AC090578.1-201ENST00000604955 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
AC090578.1-201ENST00000604955 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
AC090578.1-201ENST00000604955 POLA2Q14181 598 aa14.22□□□□□ -0.13
AC090578.1-201ENST00000604955 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
AC090578.1-201ENST00000604955 ZBTB22O15209 634 aa14.18□□□□□ -0.14
AC090578.1-201ENST00000604955 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
AC090578.1-201ENST00000604955 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
AC090578.1-201ENST00000604955 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
AC090578.1-201ENST00000604955 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
AC090578.1-201ENST00000604955 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
AC090578.1-201ENST00000604955 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
AC090578.1-201ENST00000604955 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
AC090578.1-201ENST00000604955 FBLN2P98095 1184 aa13.57□□□□□ -0.24
AC090578.1-201ENST00000604955 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
AC090578.1-201ENST00000604955 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
AC090578.1-201ENST00000604955 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
AC090578.1-201ENST00000604955 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
AC090578.1-201ENST00000604955 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
AC090578.1-201ENST00000604955 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
AC090578.1-201ENST00000604955 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
AC090578.1-201ENST00000604955 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
AC090578.1-201ENST00000604955 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
AC090578.1-201ENST00000604955 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
AC090578.1-201ENST00000604955 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
AC090578.1-201ENST00000604955 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
AC090578.1-201ENST00000604955 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
AC090578.1-201ENST00000604955 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
AC090578.1-201ENST00000604955 HAX1O00165 279 aa13.17□□□□□ -0.3
AC090578.1-201ENST00000604955 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
AC090578.1-201ENST00000604955 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC090578.1-201ENST00000604955 EVX2Q03828 476 aa13.09□□□□□ -0.31
AC090578.1-201ENST00000604955 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
AC090578.1-201ENST00000604955 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
AC090578.1-201ENST00000604955 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
AC090578.1-201ENST00000604955 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
AC090578.1-201ENST00000604955 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
AC090578.1-201ENST00000604955 GABBR2O75899 941 aa12.78□□□□□ -0.36
AC090578.1-201ENST00000604955 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
AC090578.1-201ENST00000604955 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
AC090578.1-201ENST00000604955 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
AC090578.1-201ENST00000604955 PROM2Q8N271 834 aa12.68□□□□□ -0.38
AC090578.1-201ENST00000604955 CLCN6P51797 869 aa12.62□□□□□ -0.39
AC090578.1-201ENST00000604955 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
AC090578.1-201ENST00000604955 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.4
AC090578.1-201ENST00000604955 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
AC090578.1-201ENST00000604955 POTEIP0CG38 1075 aa12.55□□□□□ -0.4
AC090578.1-201ENST00000604955 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
AC090578.1-201ENST00000604955 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
AC090578.1-201ENST00000604955 LHX8Q68G74 356 aa12.44□□□□□ -0.42
AC090578.1-201ENST00000604955 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
AC090578.1-201ENST00000604955 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
AC090578.1-201ENST00000604955 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
AC090578.1-201ENST00000604955 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
AC090578.1-201ENST00000604955 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
AC090578.1-201ENST00000604955 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
AC090578.1-201ENST00000604955 ASTLQ6HA08 431 aaPredicted RBP12.2□□□□□ -0.46
AC090578.1-201ENST00000604955 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
AC090578.1-201ENST00000604955 MIER1Q8N108 512 aa12.19□□□□□ -0.46
AC090578.1-201ENST00000604955 PLEKHG5O94827 1062 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms