RNA–Protein interactions for RNA: ENST00000549303.1

AC009135.1-201, humanhuman

TSL 2 BASIC

Gene AC009135.1, Length 776 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009135.1-201ENST00000549303 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
AC009135.1-201ENST00000549303 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
AC009135.1-201ENST00000549303 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
AC009135.1-201ENST00000549303 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
AC009135.1-201ENST00000549303 FOXD1Q16676 465 aa18.59■□□□□ 0.57
AC009135.1-201ENST00000549303 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
AC009135.1-201ENST00000549303 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
AC009135.1-201ENST00000549303 ADRA2BP18089 450 aa17.5■□□□□ 0.39
AC009135.1-201ENST00000549303 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
AC009135.1-201ENST00000549303 MSH5O43196 834 aa17.37■□□□□ 0.37
AC009135.1-201ENST00000549303 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
AC009135.1-201ENST00000549303 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
AC009135.1-201ENST00000549303 MAPK8IP2Q13387 824 aaPredicted RBP16.01■□□□□ 0.15
AC009135.1-201ENST00000549303 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
AC009135.1-201ENST00000549303 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
AC009135.1-201ENST00000549303 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
AC009135.1-201ENST00000549303 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
AC009135.1-201ENST00000549303 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
AC009135.1-201ENST00000549303 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
AC009135.1-201ENST00000549303 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
AC009135.1-201ENST00000549303 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
AC009135.1-201ENST00000549303 KCNA4P22459 653 aa14.94□□□□□ -0.02
AC009135.1-201ENST00000549303 RNF39Q9H2S5 420 aa14.81□□□□□ -0.04
AC009135.1-201ENST00000549303 CACNB1Q02641 598 aaPredicted RBP14.8□□□□□ -0.04
AC009135.1-201ENST00000549303 DNAJC5BQ9UF47 199 aa14.79□□□□□ -0.04
AC009135.1-201ENST00000549303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.06
AC009135.1-201ENST00000549303 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
AC009135.1-201ENST00000549303 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
AC009135.1-201ENST00000549303 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
AC009135.1-201ENST00000549303 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
AC009135.1-201ENST00000549303 CAPN15O75808 1086 aa14.11□□□□□ -0.15
AC009135.1-201ENST00000549303 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
AC009135.1-201ENST00000549303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
AC009135.1-201ENST00000549303 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
AC009135.1-201ENST00000549303 APLP2Q06481 763 aa14.04□□□□□ -0.16
AC009135.1-201ENST00000549303 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
AC009135.1-201ENST00000549303 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
AC009135.1-201ENST00000549303 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
AC009135.1-201ENST00000549303 DSG3P32926 999 aa13.93□□□□□ -0.18
AC009135.1-201ENST00000549303 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
AC009135.1-201ENST00000549303 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.18
AC009135.1-201ENST00000549303 ABCB7O75027 752 aa13.78□□□□□ -0.2
AC009135.1-201ENST00000549303 ZBTB22O15209 634 aa13.72□□□□□ -0.21
AC009135.1-201ENST00000549303 POLA2Q14181 598 aa13.58□□□□□ -0.24
AC009135.1-201ENST00000549303 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
AC009135.1-201ENST00000549303 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
AC009135.1-201ENST00000549303 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
AC009135.1-201ENST00000549303 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
AC009135.1-201ENST00000549303 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
AC009135.1-201ENST00000549303 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
AC009135.1-201ENST00000549303 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
AC009135.1-201ENST00000549303 FBLN2P98095 1184 aa13.11□□□□□ -0.31
AC009135.1-201ENST00000549303 POTEHQ6S545 545 aa13.06□□□□□ -0.32
AC009135.1-201ENST00000549303 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
AC009135.1-201ENST00000549303 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
AC009135.1-201ENST00000549303 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
AC009135.1-201ENST00000549303 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
AC009135.1-201ENST00000549303 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
AC009135.1-201ENST00000549303 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
AC009135.1-201ENST00000549303 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
AC009135.1-201ENST00000549303 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
AC009135.1-201ENST00000549303 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
AC009135.1-201ENST00000549303 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
AC009135.1-201ENST00000549303 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
AC009135.1-201ENST00000549303 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
AC009135.1-201ENST00000549303 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
AC009135.1-201ENST00000549303 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
AC009135.1-201ENST00000549303 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
AC009135.1-201ENST00000549303 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
AC009135.1-201ENST00000549303 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
AC009135.1-201ENST00000549303 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
AC009135.1-201ENST00000549303 HAX1O00165 279 aa12.42□□□□□ -0.42
AC009135.1-201ENST00000549303 CHADLQ6NUI6 762 aa12.35□□□□□ -0.43
AC009135.1-201ENST00000549303 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
AC009135.1-201ENST00000549303 STAG3Q9UJ98 1225 aa12.34□□□□□ -0.43
AC009135.1-201ENST00000549303 EVX2Q03828 476 aa12.22□□□□□ -0.45
AC009135.1-201ENST00000549303 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
AC009135.1-201ENST00000549303 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
AC009135.1-201ENST00000549303 PROM2Q8N271 834 aa12.16□□□□□ -0.46
AC009135.1-201ENST00000549303 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
AC009135.1-201ENST00000549303 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
AC009135.1-201ENST00000549303 FKBP8Q14318 412 aa12.07□□□□□ -0.48
AC009135.1-201ENST00000549303 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC009135.1-201ENST00000549303 GABBR2O75899 941 aa11.98□□□□□ -0.49
AC009135.1-201ENST00000549303 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
AC009135.1-201ENST00000549303 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
AC009135.1-201ENST00000549303 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
AC009135.1-201ENST00000549303 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
AC009135.1-201ENST00000549303 MIER1Q8N108 512 aa11.93□□□□□ -0.5
AC009135.1-201ENST00000549303 CLCN6P51797 869 aa11.89□□□□□ -0.51
AC009135.1-201ENST00000549303 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
AC009135.1-201ENST00000549303 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
AC009135.1-201ENST00000549303 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
AC009135.1-201ENST00000549303 PHF12Q96QT6 1004 aa11.78□□□□□ -0.52
AC009135.1-201ENST00000549303 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
AC009135.1-201ENST00000549303 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
AC009135.1-201ENST00000549303 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
AC009135.1-201ENST00000549303 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
AC009135.1-201ENST00000549303 POTEIP0CG38 1075 aa11.7□□□□□ -0.54
AC009135.1-201ENST00000549303 RASEFQ8IZ41 740 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms