RNA–Protein interactions for RNA: ENST00000474343.1

AC087879.1-201, humanhuman

BASIC

Gene AC087879.1, Length 374 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087879.1-201ENST00000474343 AEBP2Q6ZN18 517 aaPredicted RBP17.54■□□□□ 0.4
AC087879.1-201ENST00000474343 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
AC087879.1-201ENST00000474343 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
AC087879.1-201ENST00000474343 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
AC087879.1-201ENST00000474343 FOXD1Q16676 465 aa13.91□□□□□ -0.18
AC087879.1-201ENST00000474343 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
AC087879.1-201ENST00000474343 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
AC087879.1-201ENST00000474343 ADRA2BP18089 450 aa13.06□□□□□ -0.32
AC087879.1-201ENST00000474343 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
AC087879.1-201ENST00000474343 MSH5O43196 834 aa12.98□□□□□ -0.33
AC087879.1-201ENST00000474343 POTEDQ86YR6 584 aa12.52□□□□□ -0.41
AC087879.1-201ENST00000474343 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
AC087879.1-201ENST00000474343 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
AC087879.1-201ENST00000474343 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
AC087879.1-201ENST00000474343 PPP4R3CPQ6ZMV5 832 aa11.78□□□□□ -0.52
AC087879.1-201ENST00000474343 CNKSR2Q8WXI2 1034 aa11.53□□□□□ -0.56
AC087879.1-201ENST00000474343 HOXD11P31277 338 aaPredicted RBP11.45□□□□□ -0.58
AC087879.1-201ENST00000474343 DCAF8L1A6NGE4 600 aa11.41□□□□□ -0.58
AC087879.1-201ENST00000474343 RNF216Q9NWF9 866 aaPredicted RBP11.4□□□□□ -0.58
AC087879.1-201ENST00000474343 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
AC087879.1-201ENST00000474343 NPM3O75607 178 aaKnown RBP11.2□□□□□ -0.62
AC087879.1-201ENST00000474343 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
AC087879.1-201ENST00000474343 KCNA4P22459 653 aa11.15□□□□□ -0.62
AC087879.1-201ENST00000474343 CACNB1Q02641 598 aaPredicted RBP11.1□□□□□ -0.63
AC087879.1-201ENST00000474343 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
AC087879.1-201ENST00000474343 DNAJC5BQ9UF47 199 aa11.01□□□□□ -0.65
AC087879.1-201ENST00000474343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.94□□□□□ -0.66
AC087879.1-201ENST00000474343 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
AC087879.1-201ENST00000474343 SLC4A1APQ9BWU0 796 aaKnown RBP10.74□□□□□ -0.69
AC087879.1-201ENST00000474343 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
AC087879.1-201ENST00000474343 U3KPZ7 1027 aaPredicted RBP10.71□□□□□ -0.69
AC087879.1-201ENST00000474343 SLC4A2P04920 1241 aa10.66□□□□□ -0.7
AC087879.1-201ENST00000474343 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
AC087879.1-201ENST00000474343 CAPN15O75808 1086 aa10.52□□□□□ -0.73
AC087879.1-201ENST00000474343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.43□□□□□ -0.74
AC087879.1-201ENST00000474343 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
AC087879.1-201ENST00000474343 DSG3P32926 999 aa10.42□□□□□ -0.74
AC087879.1-201ENST00000474343 APLP2Q06481 763 aa10.41□□□□□ -0.74
AC087879.1-201ENST00000474343 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
AC087879.1-201ENST00000474343 SAMD1Q6SPF0 538 aaPredicted RBP10.38□□□□□ -0.75
AC087879.1-201ENST00000474343 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
AC087879.1-201ENST00000474343 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
AC087879.1-201ENST00000474343 ABCB7O75027 752 aa10.29□□□□□ -0.76
AC087879.1-201ENST00000474343 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
AC087879.1-201ENST00000474343 ZBTB22O15209 634 aa10.28□□□□□ -0.76
AC087879.1-201ENST00000474343 POLA2Q14181 598 aa10.11□□□□□ -0.79
AC087879.1-201ENST00000474343 ATF5Q9Y2D1 282 aaPredicted RBP10.11□□□□□ -0.79
AC087879.1-201ENST00000474343 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
AC087879.1-201ENST00000474343 ATXN8OSP0DMR3 200 aa9.96□□□□□ -0.82
AC087879.1-201ENST00000474343 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.82
AC087879.1-201ENST00000474343 RTN4Q9NQC3 1192 aaKnown RBP9.95□□□□□ -0.82
AC087879.1-201ENST00000474343 RBM42Q9BTD8 480 aaKnown RBP9.93□□□□□ -0.82
AC087879.1-201ENST00000474343 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
AC087879.1-201ENST00000474343 POTEHQ6S545 545 aa9.84□□□□□ -0.83
AC087879.1-201ENST00000474343 OSCARQ8IYS5 282 aa9.79□□□□□ -0.84
AC087879.1-201ENST00000474343 AKT1S1Q96B36 256 aa9.73□□□□□ -0.85
AC087879.1-201ENST00000474343 FBLN2P98095 1184 aa9.71□□□□□ -0.86
AC087879.1-201ENST00000474343 CHRDL2Q6WN34 429 aa9.69□□□□□ -0.86
AC087879.1-201ENST00000474343 FKBP8Q14318 412 aa9.67□□□□□ -0.86
AC087879.1-201ENST00000474343 MKRN4PQ13434 485 aaPredicted RBP9.65□□□□□ -0.86
AC087879.1-201ENST00000474343 REM2Q8IYK8 340 aaPredicted RBP9.65□□□□□ -0.86
AC087879.1-201ENST00000474343 SPDYE2BA6NHP3 402 aa9.6□□□□□ -0.87
AC087879.1-201ENST00000474343 SPDYE6P0CI01 402 aa9.6□□□□□ -0.87
AC087879.1-201ENST00000474343 SPDYE2Q495Y8 402 aa9.6□□□□□ -0.87
AC087879.1-201ENST00000474343 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
AC087879.1-201ENST00000474343 ZNF692Q9BU19 519 aaPredicted RBP9.51□□□□□ -0.89
AC087879.1-201ENST00000474343 PIP4P2Q8N4L2 257 aa9.48□□□□□ -0.89
AC087879.1-201ENST00000474343 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
AC087879.1-201ENST00000474343 FXR2P51116 673 aaKnown RBP eCLIP9.43□□□□□ -0.9
AC087879.1-201ENST00000474343 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
AC087879.1-201ENST00000474343 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
AC087879.1-201ENST00000474343 PABPN1Q86U42 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
AC087879.1-201ENST00000474343 PRKAR2AP13861 404 aaKnown RBP9.3□□□□□ -0.92
AC087879.1-201ENST00000474343 HAX1O00165 279 aa9.29□□□□□ -0.92
AC087879.1-201ENST00000474343 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
AC087879.1-201ENST00000474343 SP7Q8TDD2 431 aaPredicted RBP9.26□□□□□ -0.93
AC087879.1-201ENST00000474343 SPDYE4A6NLX3 237 aa9.25□□□□□ -0.93
AC087879.1-201ENST00000474343 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
AC087879.1-201ENST00000474343 EVX2Q03828 476 aa9.17□□□□□ -0.94
AC087879.1-201ENST00000474343 PLCB2Q00722 1185 aa9.16□□□□□ -0.94
AC087879.1-201ENST00000474343 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
AC087879.1-201ENST00000474343 C19orf67A6NJJ6 358 aa9.13□□□□□ -0.95
AC087879.1-201ENST00000474343 STAG3Q9UJ98 1225 aa9.13□□□□□ -0.95
AC087879.1-201ENST00000474343 FARP1Q9Y4F1 1045 aaPredicted RBP9.08□□□□□ -0.96
AC087879.1-201ENST00000474343 CREBZFQ9NS37 354 aa9.05□□□□□ -0.96
AC087879.1-201ENST00000474343 VASPP50552 380 aaPredicted RBP9.02□□□□□ -0.97
AC087879.1-201ENST00000474343 HAP1P54257 671 aaPredicted RBP9.02□□□□□ -0.97
AC087879.1-201ENST00000474343 CD44P16070 742 aaKnown RBP9.01□□□□□ -0.97
AC087879.1-201ENST00000474343 PROM2Q8N271 834 aa9.01□□□□□ -0.97
AC087879.1-201ENST00000474343 GABBR2O75899 941 aa8.97□□□□□ -0.97
AC087879.1-201ENST00000474343 DCAF8L2P0C7V8 631 aa8.97□□□□□ -0.97
AC087879.1-201ENST00000474343 BCANQ96GW7 911 aa8.97□□□□□ -0.97
AC087879.1-201ENST00000474343 IFNLR1Q8IU57 520 aaPredicted RBP8.93□□□□□ -0.98
AC087879.1-201ENST00000474343 VSIG10Q8N0Z9 540 aa8.9□□□□□ -0.98
AC087879.1-201ENST00000474343 ZRANB1Q9UGI0 708 aa8.9□□□□□ -0.98
AC087879.1-201ENST00000474343 NPM1P06748 294 aaKnown RBP eCLIP8.89□□□□□ -0.99
AC087879.1-201ENST00000474343 MNX1P50219 401 aaPredicted RBP8.89□□□□□ -0.99
AC087879.1-201ENST00000474343 PKD2Q13563 968 aa8.88□□□□□ -0.99
AC087879.1-201ENST00000474343 ZNF579Q8NAF0 562 aaKnown RBP8.87□□□□□ -0.99
AC087879.1-201ENST00000474343 TAOK2Q9UL54 1235 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms