RNA–Protein interactions for RNA: ENST00000398455.3

HIGD1C-201, Transcript of HIG1 hypoxia inducible domain family member 1C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1C, Length 371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1C-201ENST00000398455 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
HIGD1C-201ENST00000398455 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
HIGD1C-201ENST00000398455 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
HIGD1C-201ENST00000398455 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
HIGD1C-201ENST00000398455 POTEDQ86YR6 584 aa19.87■□□□□ 0.77
HIGD1C-201ENST00000398455 FOXD1Q16676 465 aa19.73■□□□□ 0.75
HIGD1C-201ENST00000398455 MSH5O43196 834 aa18.7■□□□□ 0.58
HIGD1C-201ENST00000398455 PIAS4Q8N2W9 510 aaPredicted RBP18.21■□□□□ 0.51
HIGD1C-201ENST00000398455 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
HIGD1C-201ENST00000398455 ADRA2BP18089 450 aa17.72■□□□□ 0.43
HIGD1C-201ENST00000398455 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
HIGD1C-201ENST00000398455 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
HIGD1C-201ENST00000398455 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
HIGD1C-201ENST00000398455 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
HIGD1C-201ENST00000398455 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
HIGD1C-201ENST00000398455 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
HIGD1C-201ENST00000398455 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
HIGD1C-201ENST00000398455 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
HIGD1C-201ENST00000398455 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
HIGD1C-201ENST00000398455 POTEHQ6S545 545 aa15.38■□□□□ 0.05
HIGD1C-201ENST00000398455 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
HIGD1C-201ENST00000398455 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
HIGD1C-201ENST00000398455 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
HIGD1C-201ENST00000398455 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
HIGD1C-201ENST00000398455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.03
HIGD1C-201ENST00000398455 DSG3P32926 999 aa14.63□□□□□ -0.07
HIGD1C-201ENST00000398455 CAPN15O75808 1086 aa14.56□□□□□ -0.08
HIGD1C-201ENST00000398455 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
HIGD1C-201ENST00000398455 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
HIGD1C-201ENST00000398455 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
HIGD1C-201ENST00000398455 ABCB7O75027 752 aa14.18□□□□□ -0.14
HIGD1C-201ENST00000398455 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
HIGD1C-201ENST00000398455 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
HIGD1C-201ENST00000398455 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
HIGD1C-201ENST00000398455 SP7Q8TDD2 431 aaPredicted RBP13.98□□□□□ -0.17
HIGD1C-201ENST00000398455 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
HIGD1C-201ENST00000398455 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
HIGD1C-201ENST00000398455 APLP2Q06481 763 aa13.79□□□□□ -0.2
HIGD1C-201ENST00000398455 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
HIGD1C-201ENST00000398455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.59□□□□□ -0.23
HIGD1C-201ENST00000398455 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
HIGD1C-201ENST00000398455 HAX1O00165 279 aa13.55□□□□□ -0.24
HIGD1C-201ENST00000398455 POLA2Q14181 598 aa13.52□□□□□ -0.25
HIGD1C-201ENST00000398455 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
HIGD1C-201ENST00000398455 SAMD1Q6SPF0 538 aaPredicted RBP13.5□□□□□ -0.25
HIGD1C-201ENST00000398455 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
HIGD1C-201ENST00000398455 EVX2Q03828 476 aa13.37□□□□□ -0.27
HIGD1C-201ENST00000398455 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
HIGD1C-201ENST00000398455 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
HIGD1C-201ENST00000398455 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
HIGD1C-201ENST00000398455 KCNA4P22459 653 aa13.14□□□□□ -0.31
HIGD1C-201ENST00000398455 LHX8Q68G74 356 aa13.13□□□□□ -0.31
HIGD1C-201ENST00000398455 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
HIGD1C-201ENST00000398455 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
HIGD1C-201ENST00000398455 MYCNP04198 464 aaPredicted RBP13.05□□□□□ -0.32
HIGD1C-201ENST00000398455 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
HIGD1C-201ENST00000398455 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
HIGD1C-201ENST00000398455 GABBR2O75899 941 aa12.95□□□□□ -0.34
HIGD1C-201ENST00000398455 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
HIGD1C-201ENST00000398455 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
HIGD1C-201ENST00000398455 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
HIGD1C-201ENST00000398455 POTEIP0CG38 1075 aa12.7□□□□□ -0.38
HIGD1C-201ENST00000398455 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
HIGD1C-201ENST00000398455 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
HIGD1C-201ENST00000398455 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
HIGD1C-201ENST00000398455 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
HIGD1C-201ENST00000398455 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
HIGD1C-201ENST00000398455 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
HIGD1C-201ENST00000398455 POTEMA6NI47 508 aa12.43□□□□□ -0.42
HIGD1C-201ENST00000398455 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
HIGD1C-201ENST00000398455 FBLN2P98095 1184 aa12.4□□□□□ -0.42
HIGD1C-201ENST00000398455 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.42
HIGD1C-201ENST00000398455 OTUD5Q96G74 571 aa12.38□□□□□ -0.43
HIGD1C-201ENST00000398455 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
HIGD1C-201ENST00000398455 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
HIGD1C-201ENST00000398455 POTEGQ6S5H5 508 aa12.35□□□□□ -0.43
HIGD1C-201ENST00000398455 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
HIGD1C-201ENST00000398455 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
HIGD1C-201ENST00000398455 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
HIGD1C-201ENST00000398455 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
HIGD1C-201ENST00000398455 CLCN6P51797 869 aa12.24□□□□□ -0.45
HIGD1C-201ENST00000398455 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
HIGD1C-201ENST00000398455 PABPN1Q86U42 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
HIGD1C-201ENST00000398455 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
HIGD1C-201ENST00000398455 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
HIGD1C-201ENST00000398455 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
HIGD1C-201ENST00000398455 PCDH10Q9P2E7 1040 aa12.12□□□□□ -0.47
HIGD1C-201ENST00000398455 ZBTB22O15209 634 aa12.08□□□□□ -0.48
HIGD1C-201ENST00000398455 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
HIGD1C-201ENST00000398455 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
HIGD1C-201ENST00000398455 LCE2DQ5TA82 110 aaPredicted RBP11.98□□□□□ -0.49
HIGD1C-201ENST00000398455 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
HIGD1C-201ENST00000398455 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
HIGD1C-201ENST00000398455 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
HIGD1C-201ENST00000398455 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
HIGD1C-201ENST00000398455 CREBZFQ9NS37 354 aa11.85□□□□□ -0.51
HIGD1C-201ENST00000398455 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
HIGD1C-201ENST00000398455 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
HIGD1C-201ENST00000398455 SLC39A7Q92504 469 aa11.76□□□□□ -0.53
HIGD1C-201ENST00000398455 C7P10643 843 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms