RNA–Protein interactions for RNA: ENST00000505680.1

AC004052.1-202, humanhuman

TSL 3 BASIC

Gene AC004052.1, Length 516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004052.1-202ENST00000505680 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
AC004052.1-202ENST00000505680 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
AC004052.1-202ENST00000505680 SENP3Q9H4L4 574 aaPredicted RBP15.62■□□□□ 0.09
AC004052.1-202ENST00000505680 PHF23Q9BUL5 403 aaPredicted RBP15.46■□□□□ 0.07
AC004052.1-202ENST00000505680 FOXD1Q16676 465 aa14.65□□□□□ -0.06
AC004052.1-202ENST00000505680 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
AC004052.1-202ENST00000505680 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
AC004052.1-202ENST00000505680 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
AC004052.1-202ENST00000505680 MSH5O43196 834 aa13.63□□□□□ -0.23
AC004052.1-202ENST00000505680 PIAS4Q8N2W9 510 aaPredicted RBP13.63□□□□□ -0.23
AC004052.1-202ENST00000505680 ADRA2BP18089 450 aa13.62□□□□□ -0.23
AC004052.1-202ENST00000505680 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
AC004052.1-202ENST00000505680 DMRT2Q9Y5R5 561 aa12.42□□□□□ -0.42
AC004052.1-202ENST00000505680 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
AC004052.1-202ENST00000505680 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
AC004052.1-202ENST00000505680 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
AC004052.1-202ENST00000505680 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
AC004052.1-202ENST00000505680 DCAF8L1A6NGE4 600 aa11.87□□□□□ -0.51
AC004052.1-202ENST00000505680 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
AC004052.1-202ENST00000505680 RNF216Q9NWF9 866 aaPredicted RBP11.83□□□□□ -0.52
AC004052.1-202ENST00000505680 RNF39Q9H2S5 420 aa11.69□□□□□ -0.54
AC004052.1-202ENST00000505680 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
AC004052.1-202ENST00000505680 NPM3O75607 178 aaKnown RBP11.54□□□□□ -0.56
AC004052.1-202ENST00000505680 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
AC004052.1-202ENST00000505680 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
AC004052.1-202ENST00000505680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.33□□□□□ -0.6
AC004052.1-202ENST00000505680 KCNA4P22459 653 aa11.29□□□□□ -0.6
AC004052.1-202ENST00000505680 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
AC004052.1-202ENST00000505680 SLC4A2P04920 1241 aa11.06□□□□□ -0.64
AC004052.1-202ENST00000505680 SPINK5Q9NQ38 1064 aaPredicted RBP11.03□□□□□ -0.64
AC004052.1-202ENST00000505680 CAPN15O75808 1086 aa10.94□□□□□ -0.66
AC004052.1-202ENST00000505680 DSG3P32926 999 aa10.94□□□□□ -0.66
AC004052.1-202ENST00000505680 POTEHQ6S545 545 aa10.78□□□□□ -0.68
AC004052.1-202ENST00000505680 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
AC004052.1-202ENST00000505680 ABCB7O75027 752 aa10.73□□□□□ -0.69
AC004052.1-202ENST00000505680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.71□□□□□ -0.69
AC004052.1-202ENST00000505680 HNRNPUL2Q1KMD3 747 aaKnown RBP10.71□□□□□ -0.69
AC004052.1-202ENST00000505680 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.69
AC004052.1-202ENST00000505680 APLP2Q06481 763 aa10.69□□□□□ -0.7
AC004052.1-202ENST00000505680 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
AC004052.1-202ENST00000505680 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
AC004052.1-202ENST00000505680 SLC4A1APQ9BWU0 796 aaKnown RBP10.59□□□□□ -0.71
AC004052.1-202ENST00000505680 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
AC004052.1-202ENST00000505680 POLA2Q14181 598 aa10.48□□□□□ -0.73
AC004052.1-202ENST00000505680 ATF5Q9Y2D1 282 aaPredicted RBP10.48□□□□□ -0.73
AC004052.1-202ENST00000505680 ZBTB22O15209 634 aa10.43□□□□□ -0.74
AC004052.1-202ENST00000505680 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
AC004052.1-202ENST00000505680 CHRDL2Q6WN34 429 aa10.19□□□□□ -0.78
AC004052.1-202ENST00000505680 ZBTB12Q9Y330 459 aaPredicted RBP10.18□□□□□ -0.78
AC004052.1-202ENST00000505680 OSCARQ8IYS5 282 aa10.17□□□□□ -0.78
AC004052.1-202ENST00000505680 ATXN8OSP0DMR3 200 aa10.14□□□□□ -0.79
AC004052.1-202ENST00000505680 AKT1S1Q96B36 256 aa10.13□□□□□ -0.79
AC004052.1-202ENST00000505680 REM2Q8IYK8 340 aaPredicted RBP10.07□□□□□ -0.8
AC004052.1-202ENST00000505680 PITPNM1O00562 1244 aa9.99□□□□□ -0.81
AC004052.1-202ENST00000505680 MKRN4PQ13434 485 aaPredicted RBP9.98□□□□□ -0.81
AC004052.1-202ENST00000505680 PIP4P2Q8N4L2 257 aa9.97□□□□□ -0.81
AC004052.1-202ENST00000505680 SP7Q8TDD2 431 aaPredicted RBP9.96□□□□□ -0.82
AC004052.1-202ENST00000505680 FBLN2P98095 1184 aa9.93□□□□□ -0.82
AC004052.1-202ENST00000505680 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
AC004052.1-202ENST00000505680 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
AC004052.1-202ENST00000505680 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
AC004052.1-202ENST00000505680 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.82
AC004052.1-202ENST00000505680 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
AC004052.1-202ENST00000505680 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
AC004052.1-202ENST00000505680 ZNF692Q9BU19 519 aaPredicted RBP9.79□□□□□ -0.84
AC004052.1-202ENST00000505680 HAX1O00165 279 aa9.75□□□□□ -0.85
AC004052.1-202ENST00000505680 EVX2Q03828 476 aa9.74□□□□□ -0.85
AC004052.1-202ENST00000505680 CLEC11AQ9Y240 323 aa9.74□□□□□ -0.85
AC004052.1-202ENST00000505680 SPDYE1Q8NFV5 336 aaPredicted RBP9.73□□□□□ -0.85
AC004052.1-202ENST00000505680 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
AC004052.1-202ENST00000505680 EHMT2Q96KQ7 1210 aa9.69□□□□□ -0.86
AC004052.1-202ENST00000505680 PABPN1Q86U42 306 aaKnown RBP eCLIP9.66□□□□□ -0.86
AC004052.1-202ENST00000505680 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
AC004052.1-202ENST00000505680 C19orf67A6NJJ6 358 aa9.58□□□□□ -0.88
AC004052.1-202ENST00000505680 PRR29P0C7W0 189 aa9.56□□□□□ -0.88
AC004052.1-202ENST00000505680 GABBR2O75899 941 aa9.45□□□□□ -0.9
AC004052.1-202ENST00000505680 FARP1Q9Y4F1 1045 aaPredicted RBP9.43□□□□□ -0.9
AC004052.1-202ENST00000505680 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
AC004052.1-202ENST00000505680 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
AC004052.1-202ENST00000505680 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
AC004052.1-202ENST00000505680 LHX8Q68G74 356 aa9.32□□□□□ -0.92
AC004052.1-202ENST00000505680 STAG3Q9UJ98 1225 aa9.32□□□□□ -0.92
AC004052.1-202ENST00000505680 POTEIP0CG38 1075 aa9.31□□□□□ -0.92
AC004052.1-202ENST00000505680 MNX1P50219 401 aaPredicted RBP9.25□□□□□ -0.93
AC004052.1-202ENST00000505680 ZNF579Q8NAF0 562 aaKnown RBP9.25□□□□□ -0.93
AC004052.1-202ENST00000505680 ZRANB1Q9UGI0 708 aa9.24□□□□□ -0.93
AC004052.1-202ENST00000505680 PROM2Q8N271 834 aa9.23□□□□□ -0.93
AC004052.1-202ENST00000505680 CLCN6P51797 869 aa9.18□□□□□ -0.94
AC004052.1-202ENST00000505680 GALR2O43603 387 aaPredicted RBP9.17□□□□□ -0.94
AC004052.1-202ENST00000505680 PHF12Q96QT6 1004 aa9.15□□□□□ -0.94
AC004052.1-202ENST00000505680 DCBLD2Q96PD2 775 aa9.12□□□□□ -0.95
AC004052.1-202ENST00000505680 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
AC004052.1-202ENST00000505680 PAK3O75914 559 aaPredicted RBP9.08□□□□□ -0.96
AC004052.1-202ENST00000505680 PELP1Q8IZL8 1130 aaKnown RBP9.02□□□□□ -0.97
AC004052.1-202ENST00000505680 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
AC004052.1-202ENST00000505680 POTEB2H3BUK9 544 aa9.01□□□□□ -0.97
AC004052.1-202ENST00000505680 TSPYL2Q9H2G4 693 aaPredicted RBP9□□□□□ -0.97
AC004052.1-202ENST00000505680 CCDC61Q9Y6R9 512 aa9□□□□□ -0.97
AC004052.1-202ENST00000505680 MIER1Q8N108 512 aa8.96□□□□□ -0.98
AC004052.1-202ENST00000505680 ASTLQ6HA08 431 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms