Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.23□□□□□ -1.41
NUBP1P53384 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.23□□□□□ -1.41
NUBP1P53384 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.23□□□□□ -1.41
NUBP1P53384 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NUBP1P53384 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 AC126323.6-202ENST00000568092 3511 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 AC068647.1-201ENST00000489539 2265 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.23□□□□□ -1.41
NUBP1P53384 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 AC011455.2-201ENST00000599320 3336 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 UG0898H09-202ENST00000623646 7040 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 SNORA64.1-201ENST00000362600 132 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 RNU1-49P-201ENST00000363468 159 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 RNA5SP515-201ENST00000364570 118 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 RNU6-1181P-201ENST00000384191 106 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 SNORA48.5-201ENST00000391143 135 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.23□□□□□ -1.41
NUBP1P53384 AC006028.1-201ENST00000438379 402 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.23□□□□□ -1.41
NUBP1P53384 EEF1B2P6-201ENST00000445713 673 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 RPS26P45-201ENST00000471748 340 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 RN7SKP19-201ENST00000516016 252 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.23□□□□□ -1.41
NUBP1P53384 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
NUBP1P53384 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.23□□□□□ -1.41
NUBP1P53384 AC131055.1-201ENST00000584626 316 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 AC100827.5-201ENST00000615883 426 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 MIR6837-201ENST00000620884 64 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 AC068205.3-201ENST00000636385 468 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
NUBP1P53384 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 AL596244.1-201ENST00000567068 3779 ntBASIC6.23□□□□□ -1.41
NUBP1P53384 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NUBP1P53384 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
NUBP1P53384 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.23□□□□□ -1.41
NUBP1P53384 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUBP1P53384 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 AC100757.1-201ENST00000616872 1835 ntBASIC6.22□□□□□ -1.41
NUBP1P53384 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
NUBP1P53384 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NUBP1P53384 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NUBP1P53384 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.22□□□□□ -1.41
NUBP1P53384 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.22□□□□□ -1.41
NUBP1P53384 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 RNU6-905P-201ENST00000384434 107 ntBASIC6.22□□□□□ -1.41
NUBP1P53384 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.22□□□□□ -1.41
NUBP1P53384 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC6.22□□□□□ -1.41
NUBP1P53384 SNRPGP8-201ENST00000454064 226 ntBASIC6.22□□□□□ -1.41
NUBP1P53384 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.22□□□□□ -1.41
NUBP1P53384 HMGN2P6-201ENST00000551091 273 ntBASIC6.22□□□□□ -1.41
NUBP1P53384 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
NUBP1P53384 AP000769.2-201ENST00000602344 396 ntBASIC6.22□□□□□ -1.41
NUBP1P53384 AC025754.2-201ENST00000606491 432 ntBASIC6.22□□□□□ -1.41
NUBP1P53384 AC132068.1-201ENST00000623805 459 ntBASIC6.22□□□□□ -1.41
NUBP1P53384 SNORD98-201ENST00000636377 67 ntBASIC6.22□□□□□ -1.41
NUBP1P53384 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.22□□□□□ -1.41
NUBP1P53384 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.22□□□□□ -1.41
NUBP1P53384 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUBP1P53384 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
NUBP1P53384 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.22□□□□□ -1.41
NUBP1P53384 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.21□□□□□ -1.41
NUBP1P53384 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
NUBP1P53384 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NUBP1P53384 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NUBP1P53384 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUBP1P53384 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NUBP1P53384 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
NUBP1P53384 RNA5SP507-201ENST00000363603 121 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 RNU6-106P-201ENST00000384405 107 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 MIR325-201ENST00000385260 98 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 SNORD72-201ENST00000390994 80 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 AL603914.1-201ENST00000401964 204 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC6.21□□□□□ -1.42
NUBP1P53384 snoU13.4-201ENST00000458916 104 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC6.21□□□□□ -1.42
NUBP1P53384 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.21□□□□□ -1.42
NUBP1P53384 AC010463.3-201ENST00000594077 500 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 RPL30P11-203ENST00000598995 310 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.21□□□□□ -1.42
NUBP1P53384 AC025166.1-201ENST00000612411 163 ntBASIC6.21□□□□□ -1.42
NUBP1P53384 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms