Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 Y_RNA.114-201ENST00000363265 113 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 RNU6-324P-201ENST00000363957 106 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 RNU6-1048P-201ENST00000364054 107 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 RNU6-597P-201ENST00000365620 102 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 SNORA72.4-201ENST00000384174 132 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 SNORA20B-201ENST00000384220 132 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 MIR548A1-201ENST00000385041 97 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 U3.40-201ENST00000408706 208 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 RNA5SP156-201ENST00000410250 110 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 RNA5SP475-201ENST00000410568 110 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 RN7SKP213-201ENST00000410746 298 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 AL049745.1-201ENST00000433953 286 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 AL135790.2-201ENST00000437701 267 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 H3F3BP1-201ENST00000440551 403 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 RN7SL326P-201ENST00000477493 296 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 RN7SL561P-201ENST00000488553 281 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 AC006199.1-201ENST00000548728 219 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 MIR5571-201ENST00000577998 113 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 AC005332.4-201ENST00000592752 579 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 MIR378J-201ENST00000611988 109 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 MIR6809-201ENST00000612189 116 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 AC012640.5-201ENST00000623897 319 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 AC099654.7-201ENST00000635788 2127 ntBASIC5.78□□□□□ -1.48
LHX6Q9UPM6 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 Y_RNA.245-201ENST00000364493 95 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 SNORD32A-201ENST00000364805 84 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 RNU1-46P-201ENST00000384425 164 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 RNU4-43P-201ENST00000410628 137 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 RPL26P27-201ENST00000414397 437 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC119751.6-201ENST00000416712 186 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 YPEL5P1-201ENST00000419731 367 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC245884.2-201ENST00000426257 404 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 Y_RNA.649-201ENST00000459077 103 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC100832.1-201ENST00000471945 383 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 RPL7AP6-201ENST00000477943 801 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC090958.1-201ENST00000511122 351 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 MIR4776-2-201ENST00000580204 80 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 MIR4436B2-201ENST00000581415 91 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 MIR4436B1-201ENST00000583272 91 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC116447.1-201ENST00000613153 453 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AP001318.4-201ENST00000616637 121 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC138915.1-201ENST00000565427 1685 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 AC093535.2-201ENST00000624769 2326 ntBASIC5.77□□□□□ -1.49
LHX6Q9UPM6 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LHX6Q9UPM6 DNM1P47-203ENST00000571780 12667 ntBASIC5.76□□□□□ -1.49
LHX6Q9UPM6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX6Q9UPM6 SMG1P7-201ENST00000565246 2704 ntBASIC5.76□□□□□ -1.49
LHX6Q9UPM6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LHX6Q9UPM6 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.76□□□□□ -1.49
LHX6Q9UPM6 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
LHX6Q9UPM6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX6Q9UPM6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX6Q9UPM6 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX6Q9UPM6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX6Q9UPM6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX6Q9UPM6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms