Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CAPN6Q9Y6Q1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CAPN6Q9Y6Q1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.73□□□□□ -1.65
CAPN6Q9Y6Q1 AL359893.1-201ENST00000447628 1580 ntBASIC4.73□□□□□ -1.65
CAPN6Q9Y6Q1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.73□□□□□ -1.65
CAPN6Q9Y6Q1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CAPN6Q9Y6Q1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CAPN6Q9Y6Q1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.73□□□□□ -1.65
CAPN6Q9Y6Q1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CAPN6Q9Y6Q1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AC109780.1-201ENST00000451768 1344 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 HSPA8P4-201ENST00000511877 1920 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AL590240.1-201ENST00000334118 313 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 RNU6-1059P-201ENST00000363752 98 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 Y_RNA.210-201ENST00000364161 110 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 RNU6-266P-201ENST00000364225 107 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 Y_RNA.447-201ENST00000384184 113 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 RNU6-713P-201ENST00000384761 107 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 MIR513A2-201ENST00000385249 127 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 LAP3P1-201ENST00000403648 294 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AC096664.2-201ENST00000411843 406 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 BX510359.2-201ENST00000417920 305 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 RPL23AP93-201ENST00000440847 484 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AC011753.3-201ENST00000443436 406 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 OSTCP8-201ENST00000445117 448 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 RPS24P6-201ENST00000452670 400 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AL353752.1-201ENST00000454946 260 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AC084198.1-201ENST00000477747 402 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 RPL21P103-201ENST00000479921 488 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AC068781.1-201ENST00000488231 618 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 RNA5SP154-201ENST00000516193 111 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 Y_RNA.689-201ENST00000516589 107 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 CYP4A43P-201ENST00000568156 121 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AL034351.1-201ENST00000605288 668 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 AL365434.2-201ENST00000607979 234 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 MIR8062-201ENST00000621515 85 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 ZNF137P-201ENST00000456718 1920 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 MAPK10-253ENST00000641010 4072 ntBASIC4.72□□□□□ -1.65
CAPN6Q9Y6Q1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.71□□□□□ -1.65
CAPN6Q9Y6Q1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CAPN6Q9Y6Q1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
CAPN6Q9Y6Q1 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.71□□□□□ -1.65
CAPN6Q9Y6Q1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CAPN6Q9Y6Q1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 Y_RNA.288-201ENST00000364854 92 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 MIR93-201ENST00000385024 80 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 RNU6-821P-201ENST00000390995 107 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 MIR1911-201ENST00000410783 80 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 AC011933.1-201ENST00000413334 321 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 COX6B1P1-201ENST00000415962 213 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 MRPS18CP6-201ENST00000423587 223 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 CYCSP43-201ENST00000438233 310 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 NEFMP1-201ENST00000443423 1006 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 PPIAP21-201ENST00000464473 501 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 HMGB1P25-201ENST00000468402 607 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 RPS23P3-201ENST00000470993 430 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 VN1R105P-201ENST00000486595 910 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 AC114801.2-201ENST00000503825 781 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 AC006499.6-201ENST00000511169 607 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 RNU6-408P-201ENST00000515910 100 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 RNU6-390P-201ENST00000516259 103 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 MIR3667-201ENST00000581025 74 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 Z98751.3-201ENST00000604447 521 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 MIR6891-201ENST00000618788 93 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 AC138627.2-201ENST00000624202 601 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 MIR4302-201ENST00000638058 60 ntBASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CAPN6Q9Y6Q1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CAPN6Q9Y6Q1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CAPN6Q9Y6Q1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CAPN6Q9Y6Q1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms